Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 208 1e-48 >seq2 Length=22738934 Score = 208 bits (230), Expect = 1e-48 Identities = 425/619 (69%), Gaps = 23/619 (4%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569 |||||| | |||||| | || ||| | ||||||||| | | |||| | ||||| | || Sbjct 19672552 CTGGACGGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACTGGGAATCGCTCAAACC 19672493 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 || ||||| ||||| || | ||||| | || ||||| || ||||| || ||||| Sbjct 19672492 AAG--CGAGCGTCATTTCATCTCGCACGTGCTTGCCTTCTTCGCCGCCTCGGACGGTATC 19672435 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT 25689 || || ||||||||| ||| | |||| | ||| |||||| ||||||| || Sbjct 19672434 GTAAATGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTGACGGAGGCCCGCTGC 19672375 Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749 |||||||| || ||||| || || || || |||||| || |||| | ||| ||| Sbjct 19672374 TTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATGTACTC---GCTGCTG 19672318 Query 25750 ATGACGTACAT-TACAGACGTCGCCGAGAGAGATCGG------CTGTTTGGTGCCATCGA 25802 || || ||| |||| ||| || | || || ||| ||||| || ||||| Sbjct 19672317 AT--CG-ACACGTACATACG-CGACCCGAAGGAGCGGGAGTATCTGTTCAACGCGATCGA 19672262 Query 25803 GCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG 25862 | || || | |||| |||||| ||||| |||| |||||| |||| ||| Sbjct 19672261 AACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAA 19672202 Query 25863 CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG 25922 || | ||||| ||||| |||| || || ||||| || ||||||||||| || || || Sbjct 19672201 GGCCAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTCGAGGGCATCTTCTTTAGTGG 19672142 Query 25923 TTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 |||||||||||||||||||| ||| || || ||||| |||||| || || Sbjct 19672141 CAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTC 19672082 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 |||||||| ||| | |||||||| || ||| | || |||||||||||| | | | | Sbjct 19672081 GAACGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCTGATGTTC-C 19672023 Query 26043 GGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAG-TATCATCAAAGAGGCTG 26101 || | || | || ||||| || | ||| ||| || | |||||| || || | Sbjct 19672022 GG--TATCTGGTGCAGAAACCGTCGAAGGAGCGCGT-GACGGAGATCATCCGCGATGCGG 19671966 Query 26102 TGGAGATCGAGAAGGAGTT 26120 | | ||||||| ||||||| Sbjct 19671965 TCGTGATCGAGCAGGAGTT 19671947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841200726400