Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 208 1e-48
>seq2
Length=22738934
Score = 208 bits (230), Expect = 1e-48
Identities = 425/619 (69%), Gaps = 23/619 (4%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569
|||||| | |||||| | || ||| | ||||||||| | | |||| | ||||| | ||
Sbjct 19672552 CTGGACGGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACTGGGAATCGCTCAAACC 19672493
Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629
|| ||||| ||||| || | ||||| | || ||||| || ||||| || |||||
Sbjct 19672492 AAG--CGAGCGTCATTTCATCTCGCACGTGCTTGCCTTCTTCGCCGCCTCGGACGGTATC 19672435
Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT 25689
|| || ||||||||| ||| | |||| | ||| |||||| ||||||| ||
Sbjct 19672434 GTAAATGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTGACGGAGGCCCGCTGC 19672375
Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749
|||||||| || ||||| || || || || |||||| || |||| | ||| |||
Sbjct 19672374 TTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATGTACTC---GCTGCTG 19672318
Query 25750 ATGACGTACAT-TACAGACGTCGCCGAGAGAGATCGG------CTGTTTGGTGCCATCGA 25802
|| || ||| |||| ||| || | || || ||| ||||| || |||||
Sbjct 19672317 AT--CG-ACACGTACATACG-CGACCCGAAGGAGCGGGAGTATCTGTTCAACGCGATCGA 19672262
Query 25803 GCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG 25862
| || || | |||| |||||| ||||| |||| |||||| |||| |||
Sbjct 19672261 AACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAA 19672202
Query 25863 CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG 25922
|| | ||||| ||||| |||| || || ||||| || ||||||||||| || || ||
Sbjct 19672201 GGCCAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTCGAGGGCATCTTCTTTAGTGG 19672142
Query 25923 TTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982
|||||||||||||||||||| ||| || || ||||| |||||| || ||
Sbjct 19672141 CAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTC 19672082
Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042
|||||||| ||| | |||||||| || ||| | || |||||||||||| | | | |
Sbjct 19672081 GAACGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCTGATGTTC-C 19672023
Query 26043 GGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAG-TATCATCAAAGAGGCTG 26101
|| | || | || ||||| || | ||| ||| || | |||||| || || |
Sbjct 19672022 GG--TATCTGGTGCAGAAACCGTCGAAGGAGCGCGT-GACGGAGATCATCCGCGATGCGG 19671966
Query 26102 TGGAGATCGAGAAGGAGTT 26120
| | ||||||| |||||||
Sbjct 19671965 TCGTGATCGAGCAGGAGTT 19671947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928841200726400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |