Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 3e-30
>seq2
Length=22738934
Score = 147 bits (162), Expect = 3e-30
Identities = 350/522 (67%), Gaps = 8/522 (2%)
Strand=Plus/Plus
Query 47788 CCTGTGGCAATAACAAAATCATCAGGTT-CTTCTTGTTGAAGCATTAACCACATAGCCTC 47846
|| || ||||| || ||||| || || | ||||| | || | ||| |||||||| || ||
Sbjct 20260525 CCCGTCGCAATGACGAAATCTTCCGGCTGCTTCT-GCTGCATCATCAACCACATTGCTTC 20260583
Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906
||| || ||| | || || ||||||||||| | ||| ||||| || || | | ||
Sbjct 20260584 GACGTAGTCTTTTGCGTGGCCCCAGTCACGCTTCGAATCGAGATTACCGAGCTCGACGCA 20260643
Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAA 47964
|| |||| || || || ||| | | | || || ||||| || |||||
Sbjct 20260644 CTCCTGCTGGCCGAGCGAAAT--CTTCGCCACCGAGCGAGTGATTTTACGCGTCACAAAG 20260701
Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024
| ||||| || | || || || || ||||| |||||||| | || ||| |||| |
Sbjct 20260702 TTCTCACCTCGCCGGGGCGACTCGTGGTTAAAGAGAATACCGTTGCAAGCAAACATGTTG 20260761
Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATAAGG 48083
|| | || ||||| || | ||||||||||| || || | ||| || |||| | || ||
Sbjct 20260762 TACGCCTCGCGATAATTGATCACTATCCAGTAGCCGTACATTTTCGC-ACACGCGTACGG 20260820
Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143
|| || |||||||| || || | || |||| || || || |||||| ||||| ||
Sbjct 20260821 CGATCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCGACCACCTTGCCATAGAG 20260880
Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203
||| ||||| ||||| |||| || ||| | | ||| ||| ||||| ||
Sbjct 20260881 TTCGGACGTGGACGCTTGGTAGAAGCGGACCGTCTTCTCCTGTCCAACGGTACGGATGGC 20260940
Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263
||||||| | ||| || || | ||||| | | ||||| ||| || || ||
Sbjct 20260941 ATCAAGCAGCCGCAGCGTACCGACCGCATCCACTTCCGCCGTATATTCGCTCAGGTCGAA 20261000
Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305
||| | ||| ||||| || || || |||| || || || ||
Sbjct 20261001 CGAGATCTTGACATGGCTTTGCGCGGCAAGGTTGTAGATTTC 20261042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665491821209200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |