Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2 147 3e-30 >seq2 Length=22738934 Score = 147 bits (162), Expect = 3e-30 Identities = 350/522 (67%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTT-CTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 || || ||||| || ||||| || || | ||||| | || | ||| |||||||| || || Sbjct 20260525 CCCGTCGCAATGACGAAATCTTCCGGCTGCTTCT-GCTGCATCATCAACCACATTGCTTC 20260583 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 ||| || ||| | || || ||||||||||| | ||| ||||| || || | | || Sbjct 20260584 GACGTAGTCTTTTGCGTGGCCCCAGTCACGCTTCGAATCGAGATTACCGAGCTCGACGCA 20260643 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || |||| || || || ||| | | | || || ||||| || ||||| Sbjct 20260644 CTCCTGCTGGCCGAGCGAAAT--CTTCGCCACCGAGCGAGTGATTTTACGCGTCACAAAG 20260701 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 | ||||| || | || || || || ||||| |||||||| | || ||| |||| | Sbjct 20260702 TTCTCACCTCGCCGGGGCGACTCGTGGTTAAAGAGAATACCGTTGCAAGCAAACATGTTG 20260761 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATAAGG 48083 || | || ||||| || | ||||||||||| || || | ||| || |||| | || || Sbjct 20260762 TACGCCTCGCGATAATTGATCACTATCCAGTAGCCGTACATTTTCGC-ACACGCGTACGG 20260820 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 || || |||||||| || || | || |||| || || || |||||| ||||| || Sbjct 20260821 CGATCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCGACCACCTTGCCATAGAG 20260880 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203 ||| ||||| ||||| |||| || ||| | | ||| ||| ||||| || Sbjct 20260881 TTCGGACGTGGACGCTTGGTAGAAGCGGACCGTCTTCTCCTGTCCAACGGTACGGATGGC 20260940 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 ||||||| | ||| || || | ||||| | | ||||| ||| || || || Sbjct 20260941 ATCAAGCAGCCGCAGCGTACCGACCGCATCCACTTCCGCCGTATATTCGCTCAGGTCGAA 20261000 Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||| | ||| ||||| || || || |||| || || || || Sbjct 20261001 CGAGATCTTGACATGGCTTTGCGCGGCAAGGTTGTAGATTTC 20261042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491821209200