Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11 143 2e-29 >seq11 Length=6025392 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| || | |||||||||||| || || ||||| || |||||||| |||||||| | Sbjct 3662638 TTGTGGTCAAACTGCGTTTGCGCTCCAAGTTCGCAACCAAAGTACTTGGTCGGGTAGGTA 3662579 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| || | ||| ||| | ||| | |||||| ||||| || |||||||| ||| Sbjct 3662578 GCGGGACGACCGATCGCTCGGGCCACTTCCGCCATGTTTACGATCACCGTCTTGATACCG 3662519 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || || || || || |||||||| |||||| ||||| ||||| |||||||| || Sbjct 3662518 TTTCCTTTACCCTCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATATCA 3662459 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | ||| || || || ||||| || || |||| Sbjct 3662458 GTCACGTTACGATTCACGTTTACGGTTGCCAT 3662427 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | ||| || | | || | ||||| | Sbjct 3663629 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTGTGATTCACCTCGAGGGGACCGTGGAA 3663570 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || || ||||| ||||| |||| | ||| || | ||||| | || || || Sbjct 3663569 GCCACAAGCCTTGCATCCCTGCGAGATCGTACCCTTCTTTGACGACACCAGCAGATCCGT 3663510 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||||| ||||| |||| ||||| || ||||| ||||| | ||| || Sbjct 3663509 TTCCGGGTTGTCACACTCCGGGCACAGGACAAATCGACGAATGAATCCATCCAACAGATC 3663450 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| ||| ||||| | || || || ||||| |||||||| Sbjct 3663449 CTGCAGCTTGGCGGCATCGTGCGCACCATTCACAATGAAGCGTTCGTT 3663402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840040232830