Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq11 143 2e-29
>seq11
Length=6025392
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491
|||| || | |||||||||||| || || ||||| || |||||||| |||||||| |
Sbjct 3662638 TTGTGGTCAAACTGCGTTTGCGCTCCAAGTTCGCAACCAAAGTACTTGGTCGGGTAGGTA 3662579
Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551
|| ||||| || | ||| ||| | ||| | |||||| ||||| || |||||||| |||
Sbjct 3662578 GCGGGACGACCGATCGCTCGGGCCACTTCCGCCATGTTTACGATCACCGTCTTGATACCG 3662519
Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611
|| || || || || |||||||| |||||| ||||| ||||| |||||||| ||
Sbjct 3662518 TTTCCTTTACCCTCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATATCA 3662459
Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643
| ||| || || || ||||| || || ||||
Sbjct 3662458 GTCACGTTACGATTCACGTTTACGGTTGCCAT 3662427
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262
||| ||||| || | ||||| ||||| | ||| || | | || | ||||| |
Sbjct 3663629 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTGTGATTCACCTCGAGGGGACCGTGGAA 3663570
Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322
|| || || ||||| ||||| |||| | ||| || | ||||| | || || ||
Sbjct 3663569 GCCACAAGCCTTGCATCCCTGCGAGATCGTACCCTTCTTTGACGACACCAGCAGATCCGT 3663510
Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382
|||||||||||||| ||||| |||| ||||| || ||||| ||||| | ||| ||
Sbjct 3663509 TTCCGGGTTGTCACACTCCGGGCACAGGACAAATCGACGAATGAATCCATCCAACAGATC 3663450
Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||| | ||| ||| ||||| | || || || ||||| ||||||||
Sbjct 3663449 CTGCAGCTTGGCGGCATCGTGCGCACCATTCACAATGAAGCGTTCGTT 3663402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840040232830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |