Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 6e-26
seq6 132 8e-25
seq14 89.7 8e-12
seq10 89.7 8e-12
>seq2
Length=22738934
Score = 136 bits (150), Expect = 6e-26
Identities = 229/329 (70%), Gaps = 7/329 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||||| ||||| || || || ||||| ||||||||||||
Sbjct 19672055 CCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCCCCGGCATTAGGCCGCGCTTC 19672114
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| |||||||| || ||||| || |||||||||||||| || || ||
Sbjct 19672115 TTCAGCCAGAAGATGGCCGCAAAGCTGCCACTAAAGAAGATGCCCTCGACTGCAGCGAAC 19672174
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCC 794518
| || | ||||| | ||||| |||| |||| || |||||| |||| |||||
Sbjct 19672175 GCAACCACACGCTC-CCCAAAGT----TGGCCTTCTTGCTGGAGATCCAGTTCAGCGCCC 19672229
Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578
| || ||||| ||| | || | |||| ||| ||||| ||| || || | ||| ||
Sbjct 19672230 AGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACTCCCGCT 19672289
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| |||||| | ||| |||||||| || |||||||| | || ||| | ||| |
Sbjct 19672290 CCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTGTGCACGTTCT 19672349
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667
| || || ||||| || || || ||||||
Sbjct 19672350 CCATCGCAATCTGAAACCCGTAGAAGCAG 19672378
Score = 114 bits (126), Expect = 2e-19
Identities = 164/228 (72%), Gaps = 5/228 (2%)
Strand=Plus/Plus
Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159
|||| ||||||||||| || || ||||| ||| ||||||| || | || || || ||||
Sbjct 2294758 CCGA-GAGGCCGTGCTTGAGCTGAATGCCTCAAACGAGCGTGGTATCGATGTGGTACGTA 2294816
Query 2019160 GAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGT 2019217
| | |||||| | | | | ||| | | || ||||| | ||| || |||||| |
Sbjct 2294817 GTAAGATCAAGATGTTTGCCCAGCAAAAGGTAACG--CTGCCACGCGGGCGTCACAAGAT 2294874
Query 2019218 GATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGAC 2019277
| || || |||||||| ||| || | ||| | || |||||||| || || |||
Sbjct 2294875 CGTGATTCTTGATGAGGCGGACAGCATGACGGAAGGTGCTCAGCAGGCGCTACGCCGGAC 2294934
Query 2019278 CATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACAC 2019325
|||||||| |||| |||||| || || |||||| |||| ||||||||
Sbjct 2294935 CATGGAAATCTACAGCAACACAACCCGCTTTGCGTTGGCATGCAACAC 2294982
>seq6
Length=12084465
Score = 132 bits (146), Expect = 8e-25
Identities = 174/241 (72%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| || ||||| ||||| ||||| || ||||||||| ||||||| || || |||
Sbjct 5211241 TGTACTTCGTCACGGCTTTGGTTCCCTCGGACACGGCGTGCTTGGCCAGCTCACCCGGCA 5211182
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || || ||||| ||||| || || |||| ||||||| ||| ||||| |
Sbjct 5211181 GCAGCAACCGGACGGCCGTCTGAATTTCCCGGGACGTGATCGTGGAGCGTTTGTTGTAGT 5211122
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| |||| || || | | || || |||| || || ||||| || |||||
Sbjct 5211121 GAGCCAAGCGGGACGCTTCCGCCGCAATCCGCTCGAAGATATCATTGACGAAGCTGTTCA 5211062
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | |||| |||||||| ||| ||||| |||||||| ||||||||||
Sbjct 5211061 TGATGCTCATGGCTTTGGACGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGT 5211002
Query 1485710 A 1485710
|
Sbjct 5211001 A 5211001
>seq14
Length=2944040
Score = 89.7 bits (98), Expect = 8e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 2070106 CTCTCCCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCC 2070165
||||| |||| | | |||||| ||||| ||||||| ||||| || |||| |||
Sbjct 113164 CTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCG 113105
Query 2070166 ATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCG 2070225
||||| |||||||||| ||||||| || || || ||||||||||||| ||| | |||
Sbjct 113104 ATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCA 113045
Query 2070226 AT 2070227
||
Sbjct 113044 AT 113043
Score = 89.7 bits (98), Expect = 8e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 2070106 CTCTCCCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCC 2070165
||||| |||| | | |||||| ||||| ||||||| ||||| || |||| |||
Sbjct 127875 CTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCG 127816
Query 2070166 ATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCG 2070225
||||| |||||||||| ||||||| || || || ||||||||||||| ||| | |||
Sbjct 127815 ATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCA 127756
Query 2070226 AT 2070227
||
Sbjct 127755 AT 127754
>seq10
Length=6084899
Score = 89.7 bits (98), Expect = 8e-12
Identities = 130/179 (73%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 653657 GGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTG-GGCAGCGTGCGCTCGAC 653715
|||||||| | | || ||||||||||| ||||| || ||| || | | | |
Sbjct 3839671 GGCGACAAGTTCGCATCACGCCACGGGCAGAAGGGTAC-GTGCGGGATTCAGTACCGGCA 3839613
Query 653716 CGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCA 653775
||||| ||||||| || | | ||| || ||||||||||||| |||||||||||||
Sbjct 3839612 GGAGGATATGCCGT--TCAC-GTGCGAAGGTATCACGCCCGACATCATCATCAACCCGCA 3839556
Query 653776 CGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGG 653834
|||||| ||||| || |||||||| ||| | |||| ||| | | | ||| ||| |||
Sbjct 3839555 CGCCATTCCGTCCCGTATGACCATCGGCCATTTGATCGAGTGCATTCAGGGGAAGCTGG 3839497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916213423886090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |