Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4 138 7e-28
seq9 129 4e-25
seq1 105 4e-18
>seq4
Length=15719670
Score = 138 bits (152), Expect = 7e-28
Identities = 160/214 (75%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||||||||| || || || || || || |||| ||||
Sbjct 4750571 AGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCATCC 4750630
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||| || || ||||| || |||| | |||||||||||
Sbjct 4750631 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 4750690
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || ||| || || || || |||| || || |||||| |||| ||| ||||
Sbjct 4750691 TGGATCTTTGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGG 4750748
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||||||||||| || || |||||||||||
Sbjct 4750749 TCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4750782
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| |||| |||||||| ||||| |||||||| || |||| ||||
Sbjct 15451510 AGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCC 15451451
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| || | || | || ||||||||
Sbjct 15451450 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCTTCCTTGTCC 15451391
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | |||| || || |||||| |||| || |||||
Sbjct 15451390 TGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTT 15451331
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||| || || || || |||||||||
Sbjct 15451330 TTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 15451298
>seq9
Length=6651167
Score = 129 bits (142), Expect = 4e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || |||| | ||
Sbjct 534999 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 535058
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| ||| |||| | ||||| |||||
Sbjct 535059 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCTTTGTCC 535118
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCG-ATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | |||| || | ||| |||||| || | || |||||
Sbjct 535119 TGGATCTTGGCCTTGACGTTCTCGATCGTATCCGATGG-CTCGACCTCCAGAGTGATGGT 535177
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || || ||||| || |||||||||||
Sbjct 535178 CTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 535210
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
||||| || | | || || |||| ||| | ||| ||||||||| ||||| |||||
Sbjct 534578 TTTCCACCGCGAAGCCGAAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 534637
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| || |||| | || ||||| ||||| |||||||||||||| || ||||| ||| ||
Sbjct 534638 GACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 534697
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||||||||| | || || |||||| | |||| || | ||||
Sbjct 534698 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTATCCGACGGCTCG 534757
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | || |||||||| || || || ||||| || || |||||||||
Sbjct 534758 ACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCATG 534808
>seq1
Length=30017264
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | ||| ||||||||| || || ||||| || ||| | || ||||
Sbjct 15159565 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCT 15159624
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||||||||||||||| || ||||| || | || | || ||||| ||
Sbjct 15159625 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCC 15159684
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||| || || | || ||||||
Sbjct 15159685 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGATGGTC 15159744
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || ||||| || ||||| ||||||
Sbjct 15159745 TTTCCGGTCAGAGTCTTGACGAAGATTTGCATG 15159777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691569491890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |