Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2 102 7e-17 >seq2 Length=22738934 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||| |||||| | |||| ||||||||| || || || ||| ||||| || | || Sbjct 17776316 AGGAGTGGCCCACGTCGATGAAGCAGAAACCGCAGCAGCTGAGCGATGCCGGCTTTTTCT 17776257 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 ||||||| | |||||| | || ||||| ||||| |||||| || ||||| |||| Sbjct 17776256 ACACCGGAAAGAGCGACCGCGTCAAGTGCTTTAGCTGCGGCGGTGGGCTGAAGGACTGGG 17776197 Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007 |||| || |||||||||||| | || ||||| Sbjct 17776196 AGCAGGACGATGAGCCGTGGGAGCAGCACGC 17776166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875292993590