Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq14 322 7e-83
seq2 132 7e-26
>seq14
Length=2944040
Score = 322 bits (356), Expect = 7e-83
Identities = 1005/1542 (65%), Gaps = 23/1542 (1%)
Strand=Plus/Minus
Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760
||||| | || || | ||||| || || || | ||||| || |||| | ||
Sbjct 128235 AGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGAC 128176
Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATA 68820
|| || ||||| | || ||||| || ||||| ||||||||||| || || ||||||||
Sbjct 128175 GTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATC 128116
Query 68821 GGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTC 68880
||||| | || | || | || || || || || || || || | |
Sbjct 128115 GGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCTTCAACGCCACC 128056
Query 68881 CAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTT 68940
|||| ||| ||||| | ||| | ||||| | ||||| || ||||| || || |||
Sbjct 128055 CAATTCCACAGATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTT 127996
Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000
| | || | || || || || || || |||| | || | ||| || || ||
Sbjct 127995 ACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGCT 127936
Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060
|| | || || || || || ||||| || || | || ||| || | || |||| |
Sbjct 127935 TCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGCGCTTGCTCA 127876
Query 69061 CTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCG 69120
|| ||| | ||| | | | ||| || ||||| |||| ||||| || || || |||
Sbjct 127875 CTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCG 127816
Query 69121 ATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCT 69180
|| || | || | | | || || | | ||||| || | || || || || | ||
Sbjct 127815 ATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCA 127756
Query 69181 ATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA 69240
|| || || |||||||| || || | || | || ||||| || || |||||
Sbjct 127755 ATGATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCTCCTTCAGCTTCTCGAAATCG 127696
Query 69241 AATCGTCC-ATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296
| ||| | ||| |||||||| |||| || | || || | ||| || || ||
Sbjct 127695 TA-CGTACGATCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATTGCATACGGC 127637
Query 69297 TACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGAT 69353
|| || | | || | ||||| | |||||| || || || ||| ||||||||
Sbjct 127636 CACTTCGTCCTTCGAC---GAATATTCCACTATCTCAGTGCAAAGGTTAGAGCATTTGAT 127580
Query 69354 AGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGG 69413
||| || | |||||||| || || || || || || |||||||| || || ||||
Sbjct 127579 AGTGCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGG 127520
Query 69414 AGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTATTA 69472
|| ||||| | ||| || ||||| || | ||| | || | | || || | |
Sbjct 127519 TACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACA-GATCTTGCGCCTTCACTT 127461
Query 69473 CGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCC 69530
| | | ||| || | ||||| || ||| || || ||| ||||| || || ||
Sbjct 127460 --GACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTACAGCTTCTCGAACTCTTCGCC 127403
Query 69531 CCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATC 69590
||| ||| ||| || ||||| || | || |||||||| |||| |||| |
Sbjct 127402 CCATGAATCGGCCAGCCCGGGACAATCGTGGGGGCACATCAAACTCCACGTTTCATTCGC 127343
Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650
|| || || ||||| || ||||| || ||||| ||||| || | ||| | | |
Sbjct 127342 CTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATATCCCGAGCACG 127283
Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710
| || || || || || ||||| || ||||| |||||||| | | |||| ||||||
Sbjct 127282 AACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCATGCCA 127223
Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770
||||| || || || || | | || || || ||||| || |||||||| | ||| ||
Sbjct 127222 CGGTTCGAGGTAGATAGCAAACGCGCCTGGGCGCTTATTACCGCCCTGATCAACGTACCT 127163
Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830
|| ||||| || || || | |||||||| | | || || || |||| || || ||
Sbjct 127162 TGCCGTGTTGTTGTACACACGTAGCATCGGTACCAGCCCGTTCGAAATACCGTTCGTGCC 127103
Query 69831 AGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCC 69888
|| || || |||| | || || || | | | || | | || || || || |||
Sbjct 127102 GGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GTCCGATACCACCGGCC 127045
Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948
||| ||||| | || || | || | || || || ||||| || |||||||| ||
Sbjct 127044 GATTTCGAGATCAATGCGCATTGCTTTAGAGTATCGTAGATACCTTCGATGCTATCGTCC 126985
Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008
|||| | || ||||| || ||| | ||| || | || |||| ||| |
Sbjct 126984 GACATGGTCAGCAGAAAGCAAGAAGAAAGCTGAGGACGCTGTGTGGCCGCCGCAAACATG 126925
Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068
|| ||||| ||||| || || | || |||||||||||||| || || || ||||
Sbjct 126924 GTCGGAGAAGCGTGGGTAAAGTAACGCTCTGAAAGCAGATTGTACGTCTCGATCGCTGCC 126865
Query 70069 TCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|| || ||| | | | || || || || ||||||||||||||||||||||| |||| ||
Sbjct 126864 TCAATGTCCTCGCCG-TGGATGCCAATGGCGACACGCATCAACATATGCTGCGGTCTCTC 126806
Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187
|| | || || |||||||||| || ||| |||||||||||||| || |||||
Sbjct 126805 GACAATCTTTCCCTTGATTTTCAACAAATACGATCGCTCCAGAGTTTTAAAACCGAAATA 126746
Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229
||||| |||||| | |||||||| || | ||||||||
Sbjct 126745 ATTGTACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 126704
Score = 309 bits (342), Expect = 4e-79
Identities = 1002/1542 (65%), Gaps = 23/1542 (1%)
Strand=Plus/Minus
Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760
||||| | || || | ||||| || || || | ||||| || |||| | ||
Sbjct 113524 AGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGAC 113465
Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATA 68820
|| || ||||| | || ||||| || ||||| ||||||||||| || || ||||||||
Sbjct 113464 GTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATC 113405
Query 68821 GGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTC 68880
||||| | || | || | || || || || || || || || | |
Sbjct 113404 GGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCTTCAACGCCACC 113345
Query 68881 CAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTT 68940
|||| ||| ||||| | ||| | ||||| | ||||| || ||||| || || |||
Sbjct 113344 CAATTCCACAGATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTT 113285
Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000
| | || | || || || || || || |||| | || | ||| || || ||
Sbjct 113284 ACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGCT 113225
Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060
|| | || || || || || ||||| || || | || ||| || | || |||| |
Sbjct 113224 TCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGCGCTTGCTCA 113165
Query 69061 CTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCG 69120
|| ||| | ||| | | | ||| || ||||| |||| ||||| || || || |||
Sbjct 113164 CTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCG 113105
Query 69121 ATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCT 69180
|| || | || | | | || || | | ||||| || | || || || || | ||
Sbjct 113104 ATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCA 113045
Query 69181 ATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA 69240
|| || || |||||||| || || | || | || ||||| || || |||||
Sbjct 113044 ATGATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCTCCTTCAGCTTCTCGAAATCG 112985
Query 69241 AATCGTCC-ATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296
| ||| | ||| |||||||| |||| || | || || | ||| || || ||
Sbjct 112984 TA-CGTACGATCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATTGCATACGGC 112926
Query 69297 TACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGAT 69353
|| || | | || | ||||| | |||||| || || || ||| ||||||||
Sbjct 112925 CACTTCGTCCTTCGAC---GAATATTCCACTATCTCAGTGCAAAGGTTAGAGCATTTGAT 112869
Query 69354 AGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGG 69413
||| || | |||||||| || || || || || || |||||||| || || ||||
Sbjct 112868 AGTGCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGG 112809
Query 69414 AGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTATTA 69472
|| ||||| | ||| || ||||| || | ||| | || | | || || | |
Sbjct 112808 TACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACA-GATCTTGCGCCTTCACTT 112750
Query 69473 CGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCC 69530
| | | ||| || | ||||| || ||| || || ||| ||||| || || ||
Sbjct 112749 --GACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTACAGCTTCTCGAACTCTTCGCC 112692
Query 69531 CCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATC 69590
||| ||| ||| || ||||| || | || |||||||| |||| |||| |
Sbjct 112691 CCATGAATCGGCCAGCCCGGGACAATCGTGGGGGCACATCAAACTCCACGTTTCATTCGC 112632
Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650
|| || || ||||| || ||||| || ||||| ||||| || | ||| | | |
Sbjct 112631 CTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATATCCCGAGCACG 112572
Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710
| || || || || || ||||| || ||||| |||||||| | | |||| ||||||
Sbjct 112571 AACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCATGCCA 112512
Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770
||||| || || || || | | || || || ||||| || |||||||| | ||| ||
Sbjct 112511 CGGTTCGAGGTAGATAGCAAACGCGCCTGGGCGCTTATTACCGCCCTGATCAACGTACCT 112452
Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830
|| ||||| || || || | |||||||| | | || || || |||| || || ||
Sbjct 112451 TGCCGTGTTGTTGTACACACGTAGCATCGGTACCAGCCCGTTCGAAATACCGTTCGTGCC 112392
Query 69831 AGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCC 69888
|| || || |||| | || || || | | | || | | || || || || |||
Sbjct 112391 GGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GTCCGATACCACCGGCC 112334
Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948
||| ||||| | || || | || | || || || ||||| || |||||||| ||
Sbjct 112333 GATTTCGAGATCAATGCGCATTGCTTTAGAGTATCGTAGATACCTTCGATGCTATCGTCC 112274
Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008
|||| | || ||||| || ||| | ||| || | || |||| ||| |
Sbjct 112273 GACATGGTCAGCAGAAAGCAAGAAGAAAGCTGAGGACGCTGTGTGGCCGCCGCAAACATG 112214
Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068
|| ||||| ||||| || || | || |||||||||||||| || || || ||||
Sbjct 112213 GTCGGAGAAGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGCC 112154
Query 70069 TCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|| || ||| | | | || || || || |||||||||||||||||||| || |||| ||
Sbjct 112153 TCAATGTCCTCGCCG-TGGATGCCAATAGCGACACGCATCAACATATGTTGCGGTCTCTC 112095
Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187
|| | || || || ||||||| || ||| ||||| |||||||| || |||||
Sbjct 112094 GACAATCTTTCCCTTGATCTTCAACAAATACGATCGCTCCAGGGTTTTAAAACCGAAATA 112035
Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229
||||| |||||| | |||||||| || | ||||||||
Sbjct 112034 ATTGTACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 111993
>seq2
Length=22738934
Score = 132 bits (146), Expect = 7e-26
Identities = 294/438 (67%), Gaps = 5/438 (1%)
Strand=Plus/Plus
Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667
||||| | |||||| |||||||| || || ||||| || | || | ||||| ||
Sbjct 19672025 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 19672084
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
|| || || || |||||||| || ||||| || ||||| || ||||| ||||| |||
Sbjct 19672085 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCA 19672144
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG--TAT 39785
|||||||||||| || ||||| || || ||||| | | ||| || || ||| |
Sbjct 19672145 CTAAAGAAGATGCCCTCGACTGCAGCGAACGCAACCACACGCTC-CCCAAAGTTGGCCTT 19672203
Query 39786 CATTATG--TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843
| | || ||||| ||| | ||||| || || ||||||||||| || |||| |||||
Sbjct 19672204 CTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTC 19672263
Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903
|| || || || ||||| | || | || | || || || || | |||
Sbjct 19672264 GATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAG 19672323
Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963
|||||||| || | ||| || ||||| |||||||| ||||| || || | ||
Sbjct 19672324 CGAGTACATTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGC 19672383
Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023
|| || | || ||||| | || | ||| ||| ||| ||||| || || || ||
Sbjct 19672384 CTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCATTTACGATACCGTC 19672443
Query 40024 ACTAGCGGCAAAAAATGC 40041
||||| || || ||
Sbjct 19672444 CGAGGCGGCGAAGAAGGC 19672461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906138228400
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