Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq12 100 2e-16
>seq12
Length=3202847
Score = 100 bits (110), Expect = 2e-16
Identities = 233/346 (67%), Gaps = 14/346 (4%)
Strand=Plus/Minus
Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924
||||||| | || ||||| || || ||||| | |||||| ||||||||||||| |||
Sbjct 246944 AGGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAAT---ACAA 246888
Query 40925 TATGTACTCT---GATTATACCAATAAAGGAATGGATCAA-TTACAGTGCGTTATAGATA 40980
| || | | ||||| || |||| ||||| ||| || ||| | || || || |
Sbjct 246887 AACGTGCCATGACGATTACACTGGGCAAGGCATGGACCAACTTGCAGAG-GTAATCGACA 246829
Query 40981 CGATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037
||||||| | | || |||| || || || || || |||| ||||| || | |
Sbjct 246828 AGATTAAAAACAACCCGTACGAT---CGTCGAATCATCATGAGCGCCTGGAATCCGTCCG 246772
Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATG 41097
| | | | ||||| | |||||||| |||| || ||| |||| ||| || |
Sbjct 246771 ATATCCCTAATATGGCTCTTCCACCTTGCCATTGCTTGGCTCAATTTTTTGTTGATAACG 246712
Query 41098 GTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTA 41157
| ||| | ||||| || |||||||| |||| | || |||| | || || || || |
Sbjct 246711 GAGAATTATCATGCCAGATGTATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCA 246652
Query 41158 ACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
|||| || || || | |||| || ||||||| || ||||| ||
Sbjct 246651 ACATCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCACGTCAC 246606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454498361550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |