Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 1e-15 >seq12 Length=3202847 Score = 98.7 bits (108), Expect = 1e-15 Identities = 203/301 (67%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 31255 TAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAA 31314 || || || |||||||||||||||||||| |||| |||||| ||||||||||| | | Sbjct 246639 TAGCTTGCGATGTTGAATGGTACACCCAAGCCCACATCGGCCGATCGTTGATACATCTGG 246698 Query 31315 CAGGAAAGTTCATCTCCGGT---CACGTAAAATTGAAATAACACATGACAAGGCGGCAAA 31371 || || | | |||||| | || |||||||| || ||| ||||| || | | Sbjct 246699 CATGATAAT---TCTCCGTTATCAACAAAAAATTGAGCCAAGCAATGGCAAGGTGGAAGA 246755 Query 31372 GCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGA 31431 ||||| | | | ||||| |||||||| ||||| | | | || ||| | || Sbjct 246756 GCCATATTAGGGATATCGGACGGATTCCAGGCGCTCATGATGATTCGACGATCGTACGGG 246815 Query 31432 TCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTA 31491 | ||||||| || || || ||| | ||| || || |||| || || |||| Sbjct 246816 TTGTTTTTAATCTTGTCGATTACCTCTGCAAGTTGGTCCATGCCTTGCCCAGTGTAATCG 246875 Query 31492 CTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGTCCC 31551 || || ||||| ||| || || ||||||||||||||||| || | ||| ||| Sbjct 246876 TCATGGCACGTTTTGTATTTTGCTCCAAAGTGTCGCCATTGAAACCCGTACACAGGCCCC 246935 Query 31552 A 31552 | Sbjct 246936 A 246936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513015612056800