Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 1e-15 >seq19 Length=1744624 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 179038 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 179096 |||||||||||||||| | ||| ||| || || ||| | | ||||| ||||| || Sbjct 912342 GTGAAGATGTACCTCGGGCTGG-CGCTATCCTTACCGCCCGTCAACCGCGTACCAAACTG 912284 Query 179097 ACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 179156 ||| | || | || || ||||| ||||| || | ||||| | |||| |||| Sbjct 912283 ACCGCCCGGGTACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 912224 Query 179157 AATCGTATCCGCGAGGGAGACT--TCACCGTGATGGTAAGCCGACTTGTCCGCCACATAT 179214 ||||| | || | |||| || ||||||||||| || ||| | |||||||| | Sbjct 912223 GATCGT--CGAACAGAGCGACTGCTCGCCGTGATGGTACGCGGACATTTCCGCCACCGAA 912166 Query 179215 GCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATC 179274 | |||||||| |||||||||| ||| |||| ||| | |||||||| | ||| | Sbjct 912165 CCTGCCAACTGGGCCACCTTCACCTCGCGCTTGTCGTTACGCTTGAAGCACGTAAACAGC 912106 Query 179275 ACCTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 179325 ||||| | || ||||| | ||||| |||| || ||| || ||| Sbjct 912105 ACCTTCCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGGATCGAGCGC 912055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432803563600