Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq19 84.2 3e-11 >seq19 Length=1744624 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 168431 GTAAAGATATACCTCGTTTGAGACGC-ATCCTTACCACCCATGAGACGCGTACCAAACTG 168489 || ||||| ||||||| | ||| ||||||||| ||| | | |||||||||||||| Sbjct 912342 GTGAAGATGTACCTCGGGCTGG-CGCTATCCTTACCGCCCGTCAACCGCGTACCAAACTG 912284 Query 168490 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 168549 ||| | ||| | || || ||||| ||||| || | ||||| | ||||| |||| Sbjct 912283 ACCGCCCGGGTACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 912224 Query 168550 AATCGTGTCCGCGAGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAAT 168607 ||| ||| |||| |||| || ||||| |||||||| | | || || || | Sbjct 912223 GATC--GTCGAACAGAGCGACTGCTCGCCGTGATGGTACGCGGACATTTCCGCCACCGAA 912166 Query 168608 GCCGCCAACTGCGCCACTTTCATCTC 168633 | |||||||| ||||| |||| ||| Sbjct 912165 CCTGCCAACTGGGCCACCTTCACCTC 912140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258539864400