Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 336 3e-87 >seq14 Length=2944040 Score = 336 bits (372), Expect = 3e-87 Identities = 1188/1846 (64%), Gaps = 16/1846 (1%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || || || || || | ||||||||| ||||| || | ||||| |||| ||| || Sbjct 128544 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 128485 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || |||||||| || | || ||||| | || || || | ||| || Sbjct 128484 TGGATCGAGGTTAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 128425 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 || |||||||| ||||| | ||| |||||||||| || || || | || ||| Sbjct 128424 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCC 128365 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATT-TGTATTTT--GAATGGAT 75634 |||| |||||| | | | | || | ||| | || | |||||| | || ||| Sbjct 128364 CAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCTATTTTCTGGATCGAT 128305 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 ||| | | | ||| || || || || ||||| | ||||| | ||| | Sbjct 128304 CCGTTGTGTGCCAGAATGGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGG 128245 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 | | | |||||| | || |||| ||||| || || || | |||| ||| |||| Sbjct 128244 TCCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAG 128185 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 | || || || ||||| | || |||||||| |||| ||||||||||| ||||| Sbjct 128184 ACGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCT 128125 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || ||||| ||||| | || | || | | || || || || || || || Sbjct 128124 GTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCTTC 128065 Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | ||||| ||| ||||| | ||| | | ||| | ||||| || ||||| Sbjct 128064 AACGCCACCCAATTCCACAGATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATG 128005 Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCG 75994 || ||||| | | || | || || ||||| | ||| ||||| | || | |||| Sbjct 128004 CCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCG 127945 Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 || || || || | ||| || || || || ||||| || || | || |||||| | ||| Sbjct 127944 CAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGC 127885 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114 |||| ||| || | ||| | | | ||| || ||||| || | ||||| || Sbjct 127884 GCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACA 127825 Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174 || || || || || | || | | | || || | ||||| || | ||||| || Sbjct 127824 CCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAG 127765 Query 76175 TTAATATCTATAATTTTATTGAGATTTC-TGACAACTACTTTAACCACGTCCTTTAGTTT 76233 || | || || || || || ||||| | || || | | || | || ||||| || || Sbjct 127764 TTCACGTCAATGATCTTGTTAAGATTGCGTGTCA-CGATCTTGGCGACCTCCTTCAGCTT 127706 Query 76234 GAGAAAATCAAATTTTCCATCTATC---ACAAACATATTAAGAGCTATAGATGCTAGATT 76290 ||||| | | | ||| | |||||||| || | || || || || | ||| Sbjct 127705 CTCGAAATCGTACGTACGATCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATT 127646 Query 76291 ACAAACGGCTACCTCATTAGCATTGGC--ATATTGTATTATCTCCGTGCATAGATTACTA 76348 || ||||| || || | | | | | ||||| | |||||| ||||| || ||| Sbjct 127645 GCATACGGCCACTTCGTC--CTTCGACGAATATTCCACTATCTCAGTGCAAAGGTTAGAG 127588 Query 76349 CACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGA 76408 || |||||||| |||| ||||| |||||||| || || || | ||||| || || Sbjct 127587 CATTTGATAGTGCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGC 127528 Query 76409 ACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 76468 | |||| || ||||| | |||||| ||||| || | ||| | || || Sbjct 127527 ATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCC 127468 Query 76469 TTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCA 76528 || | | | | | | || |||| | || ||| || || | | || || || Sbjct 127467 TTCACTTGACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTACAGCTTCTCGAACTCT 127408 Query 76529 TCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCA 76588 || ||||| ||| ||| || ||||| || | || |||||||| |||| || Sbjct 127407 TCGCCCCATGAATCGGCCAGCCCGGGACAATCGTGGGGGCACATCAAACTCCACGTTTCA 127348 Query 76589 TCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 76648 | ||| || || ||||| || ||||| |||||||| ||||| || | ||| || Sbjct 127347 TTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATATCCCGA 127288 Query 76649 GTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAA 76708 | | | || || || || || || || || ||||| || ||||| | | |||| | Sbjct 127287 GCACGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCA 127228 Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 ||||| ||||| || || || || | | || || || |||||||| |||||||| | Sbjct 127227 TGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGGCGCTTATTACCGCCCTGATCAACG 127168 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 || || || ||||| || || || | | ||| || | | ||||| || |||| || Sbjct 127167 TACCTTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAGCCCGTTCGAAATACCGTTC 127108 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886 || || || || || |||| ||||| || | | | || | | || || || | Sbjct 127107 GTGCCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GTCCGATACCAC 127050 Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946 | ||| ||| ||||| | || || | || | || || ||||| || || || |||| Sbjct 127049 CGGCCGATTTCGAGATCAATGCGCATTGCTTTAGAGTATCGTAGATACCTTCGATGCTAT 126990 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006 | ||| |||| | || ||||| || ||| | ||| || | || | || || Sbjct 126989 CGTCCGACATGGTCAGCAGAAAGCAAGAAGAAAGCTGAGGACGCTGTGTGGCCGCCGCAA 126930 Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066 ||| || ||||| || || || || | || ||||| |||||||| || || || Sbjct 126929 ACATGGTCGGAGAAGCGTGGGTAAAGTAACGCTCTGAAAGCAGATTGTACGTCTCGATCG 126870 Query 77067 CTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTC 77126 |||| || || ||| || || || | ||||||||||||||||||||||| |||| Sbjct 126869 CTGCCTCAATGTCCTCGCCGTGGATGCCAATGGCGACACGCATCAACATATGCTGCGGTC 126810 Query 77127 GTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 77186 || ||| |||| || ||||||||||| || ||| |||| |||||||||||| | Sbjct 126809 TCTCGACAATCTTTCCCTTGATTTTCAACAAATACGATCGCTCCAGAGTTTTAAAACCGA 126750 Query 77187 AATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||| ||||| |||||| | |||||||| || |||||||||| Sbjct 126749 AATAATTGTACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 126704 Score = 333 bits (368), Expect = 4e-86 Identities = 1187/1846 (64%), Gaps = 16/1846 (1%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || || || || || | ||||||||| ||||| || | ||||| |||| |||| || Sbjct 113833 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTAAAAG 113774 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || |||||||| || | || ||||| | || || || | ||| || Sbjct 113773 TGGATCGAGGTTAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 113714 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 || |||||||| ||||| | ||| |||||||||| || || || | || ||| Sbjct 113713 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCC 113654 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATT-TGTATTTT--GAATGGAT 75634 |||| |||||| | | | | || | ||| | || | |||||| | || ||| Sbjct 113653 CAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCTATTTTCTGGATCGAT 113594 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 ||| | | | ||| || || || || ||||| | ||||| | ||| | Sbjct 113593 CCGTTGTGTGCCAGAATGGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGG 113534 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 | | | |||||| | || |||| ||||| || || || | |||| ||| |||| Sbjct 113533 TCCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAG 113474 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 | || || || ||||| | || |||||||| |||| ||||||||||| ||||| Sbjct 113473 ACGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCT 113414 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || ||||| ||||| | || | || | | || || || || || || || Sbjct 113413 GTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCTTC 113354 Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | ||||| ||| ||||| | ||| | | ||| | ||||| || ||||| Sbjct 113353 AACGCCACCCAATTCCACAGATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATG 113294 Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCG 75994 || ||||| | | || | || || ||||| | ||| ||||| | || | |||| Sbjct 113293 CCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCG 113234 Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 || || || || | ||| || || || || ||||| || || | || |||||| | ||| Sbjct 113233 CAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGC 113174 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114 |||| ||| || | ||| | | | ||| || ||||| || | ||||| || Sbjct 113173 GCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACA 113114 Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174 || || || || || | || | | | || || | ||||| || | ||||| || Sbjct 113113 CCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGTAG 113054 Query 76175 TTAATATCTATAATTTTATTGAGATTTC-TGACAACTACTTTAACCACGTCCTTTAGTTT 76233 || | || || || || || ||||| | || || | | || | || ||||| || || Sbjct 113053 TTCACGTCAATGATCTTGTTAAGATTGCGTGTCA-CGATCTTGGCGACCTCCTTCAGCTT 112995 Query 76234 GAGAAAATCAAATTTTCCATCTATC---ACAAACATATTAAGAGCTATAGATGCTAGATT 76290 ||||| | | | ||| | |||||||| || | || || || || | ||| Sbjct 112994 CTCGAAATCGTACGTACGATCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATT 112935 Query 76291 ACAAACGGCTACCTCATTAGCATTGGC--ATATTGTATTATCTCCGTGCATAGATTACTA 76348 || ||||| || || | | | | | ||||| | |||||| ||||| || ||| Sbjct 112934 GCATACGGCCACTTCGTC--CTTCGACGAATATTCCACTATCTCAGTGCAAAGGTTAGAG 112877 Query 76349 CACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGA 76408 || |||||||| |||| ||||| |||||||| || || || | ||||| || || Sbjct 112876 CATTTGATAGTGCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGC 112817 Query 76409 ACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 76468 | |||| || ||||| | |||||| ||||| || | ||| | || || Sbjct 112816 ATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCC 112757 Query 76469 TTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCA 76528 || | | | | | | || |||| | || ||| || || | | || || || Sbjct 112756 TTCACTTGACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTACAGCTTCTCGAACTCT 112697 Query 76529 TCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCA 76588 || ||||| ||| ||| || ||||| || | || |||||||| |||| || Sbjct 112696 TCGCCCCATGAATCGGCCAGCCCGGGACAATCGTGGGGGCACATCAAACTCCACGTTTCA 112637 Query 76589 TCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 76648 | ||| || || ||||| || ||||| |||||||| ||||| || | ||| || Sbjct 112636 TTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATATCCCGA 112577 Query 76649 GTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAA 76708 | | | || || || || || || || || ||||| || ||||| | | |||| | Sbjct 112576 GCACGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCA 112517 Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 ||||| ||||| || || || || | | || || || |||||||| |||||||| | Sbjct 112516 TGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGGCGCTTATTACCGCCCTGATCAACG 112457 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 || || || ||||| || || || | | ||| || | | ||||| || |||| || Sbjct 112456 TACCTTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAGCCCGTTCGAAATACCGTTC 112397 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886 || || || || || |||| ||||| || | | | || | | || || || | Sbjct 112396 GTGCCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GTCCGATACCAC 112339 Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946 | ||| ||| ||||| | || || | || | || || ||||| || || || |||| Sbjct 112338 CGGCCGATTTCGAGATCAATGCGCATTGCTTTAGAGTATCGTAGATACCTTCGATGCTAT 112279 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006 | ||| |||| | || ||||| || ||| | ||| || | || | || || Sbjct 112278 CGTCCGACATGGTCAGCAGAAAGCAAGAAGAAAGCTGAGGACGCTGTGTGGCCGCCGCAA 112219 Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066 ||| || ||||| || || || || | || ||||| |||||||| || || || Sbjct 112218 ACATGGTCGGAGAAGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCG 112159 Query 77067 CTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTC 77126 |||| || || ||| || || || | ||||||||||||||||||||| || |||| Sbjct 112158 CTGCCTCAATGTCCTCGCCGTGGATGCCAATAGCGACACGCATCAACATATGTTGCGGTC 112099 Query 77127 GTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 77186 || ||| |||| || || |||||||| || ||| |||| ||||||||||| | Sbjct 112098 TCTCGACAATCTTTCCCTTGATCTTCAACAAATACGATCGCTCCAGGGTTTTAAAACCGA 112039 Query 77187 AATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||| ||||| |||||| | |||||||| || |||||||||| Sbjct 112038 AATAATTGTACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 111993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931637379200