Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq12 104 3e-17 >seq12 Length=3202847 Score = 104 bits (114), Expect = 3e-17 Identities = 230/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533 ||| ||||| || ||||| ||||| ||||||||| |||| |||||||| |||| || Sbjct 246944 AGGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAATACAAAAC 246885 Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATA-ACGACGT 50592 ||| | | ||||| || |||||| |||| ||||| | | | || || | | Sbjct 246884 GTGCCATGACGATTACACTGGGCAAGGCATGGACCAACTTGCAGAGGTAATCGACAAGAT 246825 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | ||||||| ||| ||||||| || || | |||| |||||||||||| ||||||| Sbjct 246824 TAAAAACAA-CCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCC 246766 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708 | | | | | | || || || ||| || |||||||| || || || || Sbjct 246765 CTAATATGGCTCTTCCACCTTGCCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAA- 246707 Query 50709 GTTTTATCCTGTCA-ATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAA 50767 ||||| || || ||| |||||| |||| || ||| |||| || || || || ||||| Sbjct 246706 ---TTATCATGCCAGATG-TATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAA 246651 Query 50768 CGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 | | || ||| | || | || || ||||||| || Sbjct 246650 CATCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCA 246612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667072615083600