Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq12 104 3e-17
>seq12
Length=3202847
Score = 104 bits (114), Expect = 3e-17
Identities = 230/339 (68%), Gaps = 12/339 (4%)
Strand=Plus/Minus
Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533
||| ||||| || ||||| ||||| ||||||||| |||| |||||||| |||| ||
Sbjct 246944 AGGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAATACAAAAC 246885
Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATA-ACGACGT 50592
||| | | ||||| || |||||| |||| ||||| | | | || || | |
Sbjct 246884 GTGCCATGACGATTACACTGGGCAAGGCATGGACCAACTTGCAGAGGTAATCGACAAGAT 246825
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| ||||||| ||| ||||||| || || | |||| |||||||||||| |||||||
Sbjct 246824 TAAAAACAA-CCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCC 246766
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708
| | | | | | || || || ||| || |||||||| || || || ||
Sbjct 246765 CTAATATGGCTCTTCCACCTTGCCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAA- 246707
Query 50709 GTTTTATCCTGTCA-ATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAA 50767
||||| || || ||| |||||| |||| || ||| |||| || || || || |||||
Sbjct 246706 ---TTATCATGCCAGATG-TATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAA 246651
Query 50768 CGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806
| | || ||| | || | || || ||||||| ||
Sbjct 246650 CATCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCA 246612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667072615083600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |