Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8407 104 5e-17 seq4824 96.9 7e-15 seq13018 93.3 9e-14 seq13561 91.5 3e-13 seq4809 91.5 3e-13 seq4745 91.5 3e-13 seq3934 91.5 3e-13 seq13560 89.7 1e-12 seq13046 89.7 1e-12 seq7934 89.7 1e-12 seq6234 89.7 1e-12 seq3052 89.7 1e-12 seq4947 86.0 1e-11 >seq8407 Length=16212 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 281740 TCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACT 281799 |||||||||| ||||| | || ||| ||||| || ||| || || || ||||||| Sbjct 7300 TCGTGAAGATGTACCTCGGGCTGGCGCTATCTTTGCCGCCCGTCAACCGCGTACCAAACT 7359 Query 281800 GACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGA 281859 |||| |||| ||| | ||| ||||| ||||| |||||||| | ||| |||||||||| Sbjct 7360 GACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGA 7419 Query 281860 CGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAAC 281919 ||| ||| ||||| ||| ||||| || |||||| ||| || || ||| Sbjct 7420 TGATCGTCGAGCAGAGCGACTGCTCGCCGTGATGGTAGGCGGACATTTCCGCCACCGAAC 7479 Query 281920 CACTGAACTGTGCTACCTTCACGTC 281944 | ||||| || |||||||| || Sbjct 7480 CCGCCAACTGGGCCACCTTCACCTC 7504 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 282633 GCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGACCG 282692 || ||||| |||||||||| ||||||||| || ||||| ||||| || | ||||||||| Sbjct 8241 GCTTCGCGCACGTTCAGCAGCTTACCGCGCAGCGGAAACACACCGTACGTATCGCGACCG 8300 Query 282693 ACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGAGA 282752 ||||| ||| || | | || | ||| || || |||||||| |||| |||||| Sbjct 8301 ACCACTCCCAGCCCCGACACGGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGC 8360 Query 282753 GTACA 282757 || || Sbjct 8361 GTGCA 8365 >seq4824 Length=29019 Score = 96.9 bits (106), Expect = 7e-15 Identities = 248/375 (66%), Gaps = 2/375 (1%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 || ||||| || || ||||| ||||| || || |||| || || | |||| ||| Sbjct 22587 CAGGCATCCACGTCCGAACTCTATGGCAAGGTGGTTGAAACGCCGCAGAACGAAAAAACT 22646 Query 61149 CCGTTTTATCCTCGTAGCCCGTATG-GTGTTGCAAAACTATACGCTTACTGGATTTGTAA 61207 || || ||||| || ||||| | |||| || ||| | |||| |||||||| | Sbjct 22647 CCATTCTATCCGCGCTCGCCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGAT 22705 Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAG 61267 ||||| |||||| |||| ||||||| |||||| ||| |||||| ||||| Sbjct 22706 CAATTATCGCGAGGCGTACAACATGTTTGCCTGTAACGGTATTCTTTTCAACCACGAATC 22765 Query 61268 TCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTTT 61327 ||| || ||| | | |||||||| || ||||| || |||| || || |||| Sbjct 22766 ACCCCGCAGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTGGCGAAGATTTC 22825 Query 61328 TAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATA 61387 ||| | | ||| | | || || || | || || || | || ||||| | Sbjct 22826 GCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGCGACTGGGGCCA 22885 Query 61388 TGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACTA 61447 ||| |||| || |||| || |||||||||||| |||| || | || || || | Sbjct 22886 CGCGAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATTT 22945 Query 61448 CGTTATTGCGACTGG 61462 ||| |||||||| || Sbjct 22946 CGTCATTGCGACGGG 22960 >seq13018 Length=10075 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 1500 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1441 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 1440 GCCCCACGTTGGGC 1427 >seq13561 Length=47919 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 165702 AAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGG 165761 || ||| ||||| ||||||||||||||||||| ||||| ||||||| |||||||| Sbjct 13303 AAGCGCAAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG 13244 Query 165762 GTTCGAGCCCCACGATGGGC 165781 |||||||||||||| ||||| Sbjct 13243 GTTCGAGCCCCACGTTGGGC 13224 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 369 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 428 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 429 CCCACGTTGGGC 440 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 37676 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37735 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 37736 CCCACGTTGGGC 37747 >seq4809 Length=18606 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 7300 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 7241 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 7240 CCCCACGTTGGGC 7228 >seq4745 Length=6500 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 2261 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2202 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2201 CCCCACGTTGGGC 2189 >seq3934 Length=12477 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 2863 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2804 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2803 CCCCACGTTGGGC 2791 >seq13560 Length=120035 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 369 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 428 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 429 CCCACGTTGGGC 440 >seq13046 Length=13960 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 10164 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 10105 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10104 CCCACGTTGGGC 10093 >seq7934 Length=6361 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 4163 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4104 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4103 CCCACGTTGGGC 4092 >seq6234 Length=17439 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 7836 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7895 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7896 CCCACGTTGGGC 7907 >seq3052 Length=24491 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 6325 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6266 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6265 CCCACGTTGGGC 6254 >seq4947 Length=13354 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 13282 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13341 Query 165770 CCCACGATGG 165779 |||||| ||| Sbjct 13342 CCCACGTTGG 13351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057628736598410