Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8951 183 3e-41 >seq8951 Length=23152 Score = 183 bits (202), Expect = 3e-41 Identities = 410/613 (67%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACGTA 16856 |||||| || || || || || || |||| | |||||||||||| || | | | || | Sbjct 2279 ATCCGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGCATGTCG-A 2337 Query 16857 CCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAG 16916 | || || || | |||| ||| || || || || ||||| || ||| || | Sbjct 2338 CTGGCAGTGCCTTGGTCAGGAATTCCTGTTCGATCACGACCGCATCGCGAATGATCTCCG 2397 Query 16917 CAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGC 16976 || || |||| ||||| | || |||| |||||||| || || || || | Sbjct 2398 TTACGCGCTCCTTCGACGGCTTCTGCACCAGATACCGGAACATCAGGCAGGCAAAGTCAC 2457 Query 16977 AATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTC 17036 | || | ||||||||| | ||| || ||||| || || |||| ||| ||||| | Sbjct 2458 AGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCCCTGGCATTAGGC 2517 Query 17037 CTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | || ||||| | ||| || || || || || ||| ||||| || ||||| || | Sbjct 2518 CGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCACTGAAGAAGATGCCCTCAACAG 2577 Query 17097 ATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCA 17156 || ||||| | | ||||| | | | || | ||| | ||||| ||| || Sbjct 2578 CAGCGAACGCAACCACACGTTCCCCAAAGTTGGCCTTCTTGCTGGAGATCCAGTTCAGCG 2637 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTT 17216 |||| ||||| || | ||||| ||| || |||||| || || || || | | ||| Sbjct 2638 CCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACTCCC 2697 Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 |||| ||||| ||| ||||| ||||| || || |||||||||| || | || Sbjct 2698 GCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTATGCACGT 2757 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 ||||||| || |||||||| ||||| ||||| ||||| |||| | || || ||| | Sbjct 2758 TCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGC 2817 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 ||| || ||| | ||||| ||||| ||||| ||||| |||||||| || || | || Sbjct 2818 TGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCGAAGAAGGCAAGTA 2877 Query 17397 TATGCTTAATGAA 17409 ||| ||||| Sbjct 2878 CGTGCGAGATGAA 2890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517452396506760