Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8951 134 2e-26 >seq8951 Length=23152 Score = 134 bits (148), Expect = 2e-26 Identities = 361/547 (66%), Gaps = 9/547 (2%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 ||||||| || || || || ||||| || |||||||| | || | ||||| || Sbjct 2436 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 2495 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 ||||| || || ||||||||||| ||||| || ||||| || || | |||||| ||| Sbjct 2496 AACGTCAGCCCTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCA 2555 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305 ||||| || || || || || || || |||| | | ||| ||| | ||| || Sbjct 2556 CTGAAGAAGATGCCCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGC-CT- 2613 Query 24306 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 24360 || || ||||| || | ||||| ||||||||||| ||||| || |||| || | Sbjct 2614 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTT 2673 Query 24361 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 24420 | || || || || ||||| | || || || | || || || |||| | Sbjct 2674 CGATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCA 2733 Query 24421 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 24480 | |||||||| ||| | ||| || || || || ||||| |||||||| || | | Sbjct 2734 GCGAGTACATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 2793 Query 24481 CCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 24540 |||| || | ||| || || | || || || | | ||| || || || || |||| Sbjct 2794 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 2853 Query 24541 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT 24599 | ||| || || || || | ||| || || || | ||| || | || || Sbjct 2854 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCG-CTCGACTTGAGC 2912 Query 24600 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 24659 | |||||| || || || || |||| ||||| |||||||||||||| || || || Sbjct 2913 GATTCCCAATCTTTCATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCT 2972 Query 24660 TCTGCCT 24666 || |||| Sbjct 2973 TCCGCCT 2979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593614678161360