Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10804 96.9 5e-15 >seq10804 Length=10989 Score = 96.9 bits (106), Expect = 5e-15 Identities = 235/350 (67%), Gaps = 17/350 (5%) Strand=Plus/Minus Query 205443 AGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACC 205502 ||| | ||| || ||||||| || | ||| || || || | || ||||||||||| Sbjct 643 AGTGACATGCGCGATCATATGGGTGAGCAAAGAGTAGCTTGCGATGTTGAATGGTACACC 584 Query 205503 TAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTAC 205562 || |||| ||| || |||| ||| |||||||| |||| | | | |||| | || Sbjct 583 CAAGCCCACATCGGCCGATCGTTGGTACATTTGGCATGATAATTCTCCGTTATCA---AC 527 Query 205563 ATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATT 205622 | |||||| | || |||||||||||||| | | ||||||| | ||| |||||| Sbjct 526 AAAAAATTGAGCCAAGCAATGACAAGGTGGAAGAGCCATATTAGGGATATCGGAAGGATT 467 Query 205623 CCAGGCTGTTAATATTATATTTCTA-GAT--TCAGGtttattttttattttatttatAAT 205679 |||||| | || || ||| | ||| | || || ||||| || || | || | Sbjct 466 CCAGGCGCT---CATGATGATTCGACGATCGTACGGGTTGTTTTTAATCTTGTCGATTAC 410 Query 205680 ATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCA----ATATATT 205735 | || | || || | ||||| | |||| | || ||| || | |||| Sbjct 409 CTCTGCAAGCTGGTCTATGCCTTGCCCAGAATAA-TCGT---CATGGCACGTTTTGTATT 354 Query 205736 TAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 | |||||||| || |||||||||||||| || || || || ||||||||| Sbjct 353 TTGCACCAAAGTGCCGCCATTGAAAACCGTACACAGGCCCCAAATCACCT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755319951817600