Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10804 114 3e-20 >seq10804 Length=10989 Score = 114 bits (126), Expect = 3e-20 Identities = 225/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || |||||||| || || ||||| || |||||||| || |||||||| |||| | || Sbjct 305 GGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGGCACTTTGGTGCAAAATACAAAACG 364 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || | ||||||| |||| | || || || || | || | || | | | | Sbjct 365 TGCCATGACGATTATTCTGGGCAAGGCATAGACCAGCTTGCAGAGGTAATCGACAAGATT 424 Query 35516 AGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCAC 35575 | | | || || | ||| | | || || |||| || ||||||||| ||| | | Sbjct 425 AAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCCGATATCCCT 484 Query 35576 CTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATT 35634 |||||||||||| || || || || | |||||||||| ||| | ||| |||||||| Sbjct 485 AATATGGCTCTTCCACCTTGTCA-TTGCTTGGCTCAATTTTTTGTTGATAACGGAGAATT 543 Query 35635 GTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 || ||||| |||| || ||| | ||||| || ||||| || || ||||| || || Sbjct 544 ATCATGCCAAATGTACCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCGC 603 Query 35695 ATCATACTCTCTTCTGACTCATCTGATGGC 35724 | |||||| | || || ||| |||| || Sbjct 604 AAGCTACTCTTTGCTCACCCATATGATCGC 633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989401332998685