Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8951 98.7 7e-16 seq3505 84.2 2e-11 >seq8951 Length=23152 Score = 98.7 bits (108), Expect = 7e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || || || |||||||| ||| || | || ||| |||||||| || ||||||||| Sbjct 2587 GCGTTCGCTGCTGTTGAGGGCATCTTCTTCAGTGGCAGCTTTGCGGCTATTTTCTGGCTG 2528 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || || ||||||||| || |||| || |||||| |||| || ||||| Sbjct 2527 AAGAAGCGCGGCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAG 2468 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 || || |||||||||||||| || || |||| Sbjct 2467 GGACTGCACTGTGACTTTGCCTGCCTGATGTT 2436 >seq3505 Length=28826 Score = 84.2 bits (92), Expect = 2e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 33543 CAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCA 33601 ||||||| ||||| | | || || || | || |||||||||||||| || ||| Sbjct 18473 CAAGATCCGCGTGCGCTCGGTGCGTATTCCGCAAATCGGCGACAAGTTTGCTTCACGTCA 18532 Query 33602 CGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCG 33661 ||| | ||||||| |||||||| || |||| ||| ||| |||||||||||| || Sbjct 18533 CGGAC-AGAAGGGTACGTGCGGGATTCAGTACCGGCAGGAGGATATGCCGTTCACGTGCG 18591 Query 33662 ACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 | || | || ||| | ||||||||||||| || | || ||||| ||||| Sbjct 18592 AAGGTATCACACCCGACATCATCATCAACCCGCACGCCATTCCGTCGCGTATGAC 18646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356171050612021