Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8951 176 6e-39 >seq8951 Length=23152 Score = 176 bits (194), Expect = 6e-39 Identities = 368/546 (67%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 ||||||| || || || || |||||||| |||||||| | || || ||||| || Sbjct 2436 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 2495 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 ||||| || || ||||||||||| ||||| || ||||| || || | |||||| ||| Sbjct 2496 AACGTCAGCCCTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCA 2555 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || || || || ||||| | | || ||| | |||| || Sbjct 2556 CTGAAGAAGATGCCCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGC-CT- 2613 Query 50131 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || || ||||| || | ||||| ||||||||||| ||||| || |||| ||||| Sbjct 2614 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTT 2673 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || || || || ||||| | || || || | || || ||||||| | Sbjct 2674 CGATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCA 2733 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | |||||||| ||| | ||| || || || |||||||| |||||||| || | | Sbjct 2734 GCGAGTACATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 2793 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 |||| || | |||||| || | || || || | | ||| || || || || |||| Sbjct 2794 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 2853 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 | ||| || || || || | ||| || || || || ||| | | | || Sbjct 2854 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGACTTGAGCG 2913 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | |||||| || || || || |||| || || |||||||||||||| || || || | Sbjct 2914 ATTCCCAATCTTTCATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTT 2973 Query 50486 CTGCCT 50491 | |||| Sbjct 2974 CCGCCT 2979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718139448767480