Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8951 161 1e-34 >seq8951 Length=23152 Score = 161 bits (178), Expect = 1e-34 Identities = 367/547 (67%), Gaps = 9/547 (2%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 ||||||| || || || || |||||||| ||||| || | || | ||||| || Sbjct 2436 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 2495 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 ||||| || || ||||||||||| ||||| || ||||| || |||| |||||| ||| Sbjct 2496 AACGTCAGCCCTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCA 2555 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 |||||||| || || || || || || |||| | | || ||| | ||| || Sbjct 2556 CTGAAGAAGATGCCCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGC-CT- 2613 Query 42236 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 || || ||||| || | ||||| ||||||||||| ||||| || |||| ||||| Sbjct 2614 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTT 2673 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | || || || || ||||| | || || || | || || ||||||| | Sbjct 2674 CGATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCA 2733 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | |||||||| ||| | ||| || || || |||||||| |||||||| || | || Sbjct 2734 GCGAGTACATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 2793 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 |||| || ||||| || || | || || || | | ||| ||||| || || |||| Sbjct 2794 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 2853 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATT 42530 | ||| || || || || | ||| || || || | ||| | | || | Sbjct 2854 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCG-CTCGACTTGAGC 2912 Query 42531 TATT-CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 ||| |||||| || || || || |||| || || ||||| || ||||| || || ||| Sbjct 2913 GATTCCCAATCTTTCATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCT 2972 Query 42590 TCTGCCT 42596 || |||| Sbjct 2973 TCCGCCT 2979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671018336219320