Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8295 105 7e-18 >seq8295 Length=14778 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || ||||| || || |||||||| || || |||| ||||| || ||| Sbjct 4941 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCTTCCAGCTGT 5000 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || || |||||||||| |||||||| ||||| || || || ||||| || || Sbjct 5001 TTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTG 5060 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | ||| | |||||||| || || || |||| ||| | ||||||||||| Sbjct 5061 GCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTG 5120 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | |||||| ||||| || ||||| Sbjct 5121 AGTGTTTTCACGAAAATCTGCAT 5143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506923093044240