Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3504 93.3 5e-14 >seq3504 Length=26898 Score = 93.3 bits (102), Expect = 5e-14 Identities = 213/315 (68%), Gaps = 12/315 (4%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | |||||| | ||||| || ||||| ||||| ||||||| Sbjct 9888 ATTGGGATTTTGGAAGAATGGGCATTGGTGGTCTGGATCGTGAATTCAACGCTATTTTCC 9829 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 ||||||| ||||| || || | |||| || | | | | | || || |||| Sbjct 9828 GACGAGCTTTTGCATCACGAGTATTTCCACCGGAGGTGGTCGAGCAGCTTGGATGCAAAC 9769 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | || || || || | |||| || |||||| ||||||||| || ||||| || Sbjct 9768 ATGTGAAGGGTATACTACTTTATGGTCCACCTGGTACCGGTAAAACTTTGATGGC--GAG 9711 Query 164573 GCA--TTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAAT 164626 ||| | | | ||| | |||| ||||| || |||||||||||||| || || Sbjct 9710 GCAGATCGGTACAA--TGCTAAACGCCCGCGAACCC--AAAATTGTTAATGGACCGCAAA 9655 Query 164627 TATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTG 164686 | ||| |||| ||||| || || || ||||| || ||| | ||||| || || | Sbjct 9654 TTTTGGACAAGTATGTTGGCGAATCTGAAGCGAACGTTCGGCGACTGTTTGCCGATGCAG 9595 Query 164687 AAGAAGAACAAAAGA 164701 | |||||| |||||| Sbjct 9594 AGGAAGAAGAAAAGA 9580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595764690901200