Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10804 107 5e-18 >seq10804 Length=10989 Score = 107 bits (118), Expect = 5e-18 Identities = 210/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||| | || || || ||||| ||||||||||| |||||||||||| | |||||||| Sbjct 304 AGGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGGCACTTTGGTGCAAAATACAAAAC 363 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCA-ATTACAGAATGTCATTGATCAAA 111606 || ||| ||| | || || | || || || ||| | || || || | | Sbjct 364 GTGCCATGACGATTATTCTGGGCAAGGCATAGACCAGCTTGCAG-AGGTAATCGACAAGA 422 Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666 |||| |||||||| |||||| || || ||||| || ||||| || | | Sbjct 423 TTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCCGATATCC 482 Query 111667 AAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 || ||||| |||||||| |||||| || || |||| ||| | |||| Sbjct 483 CTAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAAT 542 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 | |||||||||||||| || ||||| || ||| | || | ||||| || || || || | Sbjct 543 TATCATGCCAAATGTACCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCG 602 Query 111787 CAAGTTAC 111794 |||| ||| Sbjct 603 CAAGCTAC 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303113014366274