Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6044 129 5e-25 seq8295 114 1e-20 seq5453 87.8 2e-12 seq13424 86.0 5e-12 >seq6044 Length=6192 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || || || Sbjct 4272 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 4331 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || |||||||||||||| || || ||| Sbjct 4332 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGAT 4391 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | |||||| ||||||| | ||||||||| Sbjct 4392 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGATTAC 4451 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || ||| | ||| | || | || ||||||| ||| Sbjct 4452 AATATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGGT 4502 >seq8295 Length=14778 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| | ||||| || || |||||||||| || || | | Sbjct 5143 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCG 5084 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| || || || ||||| Sbjct 5083 GACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 5024 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||||||| | || ||| |||||| | || || |||||| Sbjct 5023 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAGATGGCCGCACTCTGTCGGACTACAAC 4964 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||||||| Sbjct 4963 ATCCAGAAGGAATCCACC 4946 >seq5453 Length=57727 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || ||||||| || || || | | Sbjct 57537 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 57596 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | |||| || || || ||||||||||| || || || ||||| Sbjct 57597 GATACGATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 57656 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||||| | ||||| |||||| Sbjct 57657 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 57716 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 57717 ATCCAGAAGGA 57727 >seq13424 Length=49246 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | || || || || ||||||| || || || | | ||||| | || Sbjct 1 GTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGATACGATCGAG 60 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | |||| || || || ||||||||||| || || || ||||| || ||||| || Sbjct 61 AACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATC 120 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| ||| | ||||| ||||| | ||||| |||||||| || || || Sbjct 121 TTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAACATCCAGAAGGAG 180 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||| | || || || | || | ||||| || Sbjct 181 TCGACCTTGCACTTGGTCCTCCGGCTTCGCGGTGG 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419654301927955