Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8407 95.1 2e-14 seq13561 93.3 9e-14 seq13560 91.5 3e-13 seq13046 91.5 3e-13 seq13018 91.5 3e-13 seq7934 91.5 3e-13 seq6234 91.5 3e-13 seq3052 91.5 3e-13 seq4809 89.7 1e-12 seq4745 89.7 1e-12 seq3934 89.7 1e-12 seq4947 87.8 4e-12 >seq8407 Length=16212 Score = 95.1 bits (104), Expect = 2e-14 Identities = 211/313 (67%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 ||| || || || || || |||| || | ||||| ||||| ||| | || ||| | Sbjct 7589 GCGCTCGATCCCGTGCATGCTGGACGGGTTGAAGCCGGGCCAGCGGAAGGTGCTGTTTAC 7530 Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684 |||||||| ||| | || | ||||| || ||||| | |||| || | Sbjct 7529 GTGCTTCAAGCGTAACGACAAGCGCGAGGTGAAGGTGGCCCAGTTGGCGGGTTCGGTGGC 7470 Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAG--TCTGCAGGGTGCCATTGTAGGCATG 218742 ||||| || | |||||||||||| |||||| ||||| | | || | | || Sbjct 7469 GGAAATGTCCGCCTACCATCACGGCGAGCAGTCGCTCTGCTCGACG--ATCATCAACCTG 7412 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || ||| |||| || ||||| |||||||| ||| ||||| || ||||||||||||| Sbjct 7411 GCGCAGAACTACGTCGGCAGCAACAACATCAACCTGCTGTATCCGGGCGGTCAGTTTGGT 7352 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGT 218860 | || | ||| || || ||||| || | ||| ||||| ||||| || | | ||| Sbjct 7351 ACGCGGTTGACGGGCGGCAAAGATAGCGC--CAGCCCGAGGTACATCTTCACGATGATGT 7294 Query 218861 CGCCCGTGACGCG 218873 || || ||||||| Sbjct 7293 CGGCCCTGACGCG 7281 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || ||| |||| | || || | Sbjct 8366 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 8307 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| ||||| || | ||| ||| | || || || || ||||||||||| |||||||| Sbjct 8306 AGTGGTCGGTCGCGATACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 8247 Query 217956 CGATGC 217961 ||| || Sbjct 8246 CGAAGC 8241 >seq13561 Length=47919 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 13296 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 13237 Query 142563 CCCCACATCGGGCAGA 142578 |||||| | |||| || Sbjct 13236 CCCCACGTTGGGCGGA 13221 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 369 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 428 Query 142564 CCCACATCGGGCAGAAG 142580 ||||| | |||| |||| Sbjct 429 CCCACGTTGGGC-GAAG 444 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 37675 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 37734 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 37735 CCCCACGTTGGGC 37747 >seq13560 Length=120035 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 369 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 428 Query 142564 CCCACATCGG--GCAGAAG 142580 ||||| | || ||||||| Sbjct 429 CCCACGTTGGGCGCAGAAG 447 >seq13046 Length=13960 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 10165 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 10106 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 10105 CCCCACGTTGGGC 10093 >seq13018 Length=10075 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1501 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1442 Query 142561 AGCCCCACATCGGGCAGA 142578 |||||||| | |||| || Sbjct 1441 AGCCCCACGTTGGGCGGA 1424 >seq7934 Length=6361 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4164 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4105 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4104 CCCCACGTTGGGC 4092 >seq6234 Length=17439 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 7835 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 7894 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 7895 CCCCACGTTGGGC 7907 >seq3052 Length=24491 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 6326 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 6267 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 6266 CCCCACGTTGGGC 6254 >seq4809 Length=18606 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 7299 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7240 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 7239 CCCACGTTGGGC 7228 >seq4745 Length=6500 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2260 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2201 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2200 CCCACGTTGGGC 2189 >seq3934 Length=12477 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2862 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2803 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2802 CCCACGTTGGGC 2791 >seq4947 Length=13354 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 13281 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 13340 Query 142563 CCCCAC 142568 |||||| Sbjct 13341 CCCCAC 13346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027647071926287