Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq10852 105 2e-19 >seq10852 Length=8264 Score = 105 bits (116), Expect = 2e-19 Identities = 223/329 (68%), Gaps = 13/329 (4%) Strand=Plus/Plus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 ||| |||||||||||||| |||||||| ||| |||||| | |||||| | || | Sbjct 6006 CTGTGAGCTGCTAAACTTCGTCAACGTGCTCGGACAGATCTATTTCATGGACTTTTTCCT 6065 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG---GAAGCCGC 3314 | || ||| || | |||||| | | |||| ||||| | || ||| ||| Sbjct 6066 GGACGGAGAGTTCACGACGTACGGTAGCGATGTGGTGCGCTTCACCGAGATGGAACCCGA 6125 Query 3315 CCATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTT 3374 || | || ||| || ||| ||| || ||||| | | | || |||||| || Sbjct 6126 A-----GAGCGTGGCGATCCG-ATGGCGCGCGTGTTTCCGAAAGTGACCAAATGTACCTT 6179 Query 3375 TCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGA 3434 ||||| |||||||| || || || | || | ||| || || ||| | || ||| Sbjct 6180 CCACAAGTACGGTCCGTCCGGTAGTGTGCAGAAGTTCGACGGCCTGTGCGTGCTGCCGCT 6239 Query 3435 GAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCAT 3494 |||| | |||||||| ||||||||| | ||||| |||||||||||| |||| | || Sbjct 6240 GAACATCGTCAACGAAAAGATCTACGTGTTCCTGTGGTTCTGGTTCATTCTGCTGACTAT 6299 Query 3495 CATCAGCGG--TATCGTTGTTCTGTACCG 3521 | ||| ||| | ||| ||| ||||||| Sbjct 6300 CCTCACCGGCATCTCGCTGT--TGTACCG 6326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478033444500