Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq8295 105 6e-18 seq633 87.8 2e-12 >seq8295 Length=14778 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| |||| | || | || | || ||||| || || |||||||| || Sbjct 4915 TACCACCACGGAGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCG 4974 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || ||| || |||||| || ||||| || ||| |||| |||||||| || ||||||| Sbjct 4975 ACAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAG 5034 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || || || ||||| ||||| || | | ||| | ||||| | | |||| Sbjct 5035 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGA 5094 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 | || | || | || |||||||| || ||||| || ||||||||||||| Sbjct 5095 CCTCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGG 5145 >seq633 Length=15238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| || || || || ||| |||| |||||||| || || ||||| |||||||| || Sbjct 3 ATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTT 62 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || |||||| || | | || | |||||| | | || || |||| || | Sbjct 63 ATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGAT 122 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389 || || ||||||||||| || || ||||||||||| |||||| Sbjct 123 GGTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT-GCTTAA 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420060630570084