Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8951 269 5e-67 >seq8951 Length=23152 Score = 269 bits (298), Expect = 5e-67 Identities = 426/606 (70%), Gaps = 7/606 (1%) Strand=Plus/Minus Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 || |||| ||||||||||||||||| ||||| || || || ||||| |||| | | Sbjct 2880 ACGTACTTGCCTTCTTCGCCGCCTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCT 2821 Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAG 42537 ||| | ||||||||| ||||| |||||||||||||| || ||||| || || | Sbjct 2820 TCAGCCAGGAGGTGCAGGTGACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGG 2761 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCG 42597 |||||||||| || ||||| | ||| || |||||||||| | || || | Sbjct 2760 AGAACGTGCATAGCGAAATGTACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGG 2701 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 |||| | |||||||| || || || ||| |||| ||| | ||||||||||| |||| Sbjct 2700 AGCGGGAGTATCTGTTCAACGCGATCGAAACGCTGCCGTGCGTAAAGAAGAAGGCCGACT 2641 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||||| ||||||||| || | || | |||| || || || | |||| || || Sbjct 2640 GGGCGCTGAACTGGATCTCCAG-CAAGAAGGCCAAC-TTTGGGGAACGTGTGGTTGCGTT 2583 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | || || ||||||||||||||| ||| ||| || | || |||||||| ||| | Sbjct 2582 CGCTGCTGTTGAGGGCATCTTCTTCAGTGGCAGCTTTGCGGCTATTTTCTGGCTGAAGAA 2523 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | ||||| || || || ||||||||||| || ||| | |||||||| || Sbjct 2522 GCGCGGCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAGGGACT 2463 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGA 42895 ||| | |||||||||||||| ||||| | | || ||| ||||| |||||||| Sbjct 2462 GCACTGTGACTTTGCCTGCCTGATGTTC---CGGTATCTGGTGCAGAAGCCGTCGAAGGA 2406 Query 42896 GCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 ||| || || ||||| || || || | |||||| |||| ||||| || || | Sbjct 2405 GCGCGTAACGGAGATCATTCGCGATGCGGTCGTGATCGAACAGGAATTCCTGACCAAGGC 2346 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015 ||||| || | || ||||||||||| ||| || |||| ||||||| ||| ||| Sbjct 2345 ACTGCCAGTCGACATGCTCGGCATGAACTGCGAACTGATGTCGCAGTACATTGAGTTCGT 2286 Query 43016 CGCCGA 43021 || || Sbjct 2285 GGCGGA 2280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944169136314320