Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq14080 122 7e-23 seq6044 87.8 1e-12 seq14285 86.0 5e-12 >seq14080 Length=20585 Score = 122 bits (134), Expect = 7e-23 Identities = 207/295 (70%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| |||| |||||| | |||||||||| || || | ||||| ||| ||| Sbjct 7577 GAAACAGCCCACACCCACGATGACCTGTGGAACGCAGCCCAGCTGCAGCTAGTGAAGGAG 7636 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 | |||||||| || |||||||||||||| |||||||| | || ||| | || Sbjct 7637 GCCAAGATGCACGGGTTCCTGCGCATGTATTGGGCGAAGAAAATACTAGAGTGGAC-GAA 7695 Query 37935 GATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGG 37993 | || | || ||||| | ||||| ||||| || ||| ||||| |||| || Sbjct 7696 AACGCCCGAGGAAGCGCTTGAAACGGCCATCTATCTGAACGATCGCTACAGTCTGGATGG 7755 Query 37994 GCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAG 38052 ||| ||||| || || |||||||| || ||||||| || ||| ||| | || ||| | Sbjct 7756 GCGCGATCCGAATGGGTACGTCGGGTGCATGTGGTCCAT-TGCCGGCATCCATGATCAGG 7814 Query 38053 CCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| ||| |||| ||||| |||||||||||||||||| |||| || Sbjct 7815 GATGGAAGGAGCGGGAAATTTTTGGCAAAATTCGGTACATGAACTACGACGGCTG 7869 >seq6044 Length=6192 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || |||||||||||||| || ||||||||| || |||||||| | Sbjct 4502 ACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGA 4443 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||||||||| || || || |||||||||||| ||| Sbjct 4442 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 4383 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 4382 GATACCCTCCTTGTCC 4367 >seq14285 Length=18903 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 ||| ||||||| ||| || |||||||| || || ||| ||||||||| || ||||| || Sbjct 210 GAAGCCTCCTCGCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTC 151 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || || | || |||| ||||| ||||| || ||||| ||||||||||| Sbjct 150 TGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATC 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396992681674414