Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4824 114 3e-20 >seq4824 Length=29019 Score = 114 bits (126), Expect = 3e-20 Identities = 256/382 (67%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| || || |||| || | ||||| || ||| |||| || |||| ||||| || Sbjct 22586 CCAGGCATCCACGTCCGAACTCTATGGCAAGGTGGTTGAAACGCCGCAGAACGAAAAAAC 22645 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTA 68523 ||| || ||||| || || |||| |||| || || |||||| || ||||| | Sbjct 22646 TCCATTCTATCCGCGCTCGCCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGA 22704 Query 68524 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGA 68583 ||||| || ||| |||| ||||||| || || ||| ||| |||||| ||||| Sbjct 22705 TCAATTATCGCGAGGCGTACAACATGTTTGCCTGTAACGGTATTCTTTTCAACCACGAAT 22764 Query 68584 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 68643 ||| ||| || | | || ||||| || |||||||| ||| ||||| |||| Sbjct 22765 CACCCCGCAGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTGGCGAAGATTT 22824 Query 68644 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703 || | | ||| | | ||||||||| | ||| | || | || ||||| Sbjct 22825 CGCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGCGACTGGGGCC 22884 Query 68704 ATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACT 68763 | ||||| || ||||| |||||||||||||||||| |||| || | ||||| || | Sbjct 22885 ACGCGAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATT 22944 Query 68764 ATGTGATTGCAACAGGGAAAAC 68785 || ||||| || || |||| Sbjct 22945 TCGTCATTGCGACGGGCGAAAC 22966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102676419725450