Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8295 134 1e-26 seq6044 122 8e-23 seq13424 102 8e-17 seq633 100 3e-16 seq5453 96.9 3e-15 seq14285 84.2 2e-11 seq8951 84.2 2e-11 >seq8295 Length=14778 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||| || | || || || || || || ||||| || | Sbjct 4917 CCACCACGGAGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 4976 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||| || ||| |||||| ||||||||||| ||||| Sbjct 4977 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 5036 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | ||||| ||||||| | |||||| Sbjct 5037 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACC 5096 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || | || | || |||||||| || ||||| || ||||||||||||| Sbjct 5097 TCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGG 5145 >seq6044 Length=6192 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| | || | ||||| ||| | || ||||| || || |||||||||||| Sbjct 4504 GCACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCG 4445 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| ||| || ||||| || || ||| |||| | ||||||||||| || Sbjct 4444 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGC 4385 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| ||| ||| | | |||| || |||| |||| Sbjct 4384 GGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCG 4325 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 4324 ACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4275 >seq13424 Length=49246 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 216 TCCACCGCGAAGCCGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 157 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| || || ||||| || || ||| |||||| ||||||||||| || || Sbjct 156 CAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 97 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| | |||| || |||| |||||| Sbjct 96 GATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTATCCGACGGCTCGAC 37 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | || | || ||||| |||||||| || || Sbjct 36 CTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCAC 1 >seq633 Length=15238 Score = 100 bits (110), Expect = 3e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| ||||| ||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct 3 ATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTT 62 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||| | | |||| |||||||| ||| || || | || | Sbjct 63 ATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGAT 122 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 127119 || || ||||||||||| || || ||||||||||| ||||| Sbjct 123 GGTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT-GCTTA 163 >seq5453 Length=57727 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982 || || || || ||||| ||| || ||||| || || ||||| || || ||| || Sbjct 57727 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 57668 Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGT 127042 |||| ||||||||||| || || || |||||||||||| ||| || ||||| | Sbjct 57667 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 57608 Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102 |||| || |||| |||||| || | || | || ||||| |||||||| || || Sbjct 57607 TCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACG 57548 Query 127103 AAAATCTGCAT 127113 || |||||||| Sbjct 57547 AAGATCTGCAT 57537 >seq14285 Length=18903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || || |||||||| || || || || ||| || Sbjct 189 CACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTC 130 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| ||||| ||| |||||| ||||||||||| ||||| ||||| ||||| ||| Sbjct 129 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTG 70 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | | |||| |||||||| ||| || || | || | || || Sbjct 69 AATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGATGGTCTT 10 Query 127084 GCCGGTCAG 127092 |||||||| Sbjct 9 TCCGGTCAG 1 >seq8951 Length=23152 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 47085 AAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCA-CTCTGGCCGAACGTTT 47143 |||||||| ||||| |||| | || | | | || | || || ||| |||||| | Sbjct 2650 AAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCCAACTTTGGG-GAACGTGT 2592 Query 47144 GATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTA 47203 | | || ||||| || |||||| |||||||| |||||||||||||| || || | Sbjct 2591 GGTTGCGTTCGCTGCTGTTGAGGGCATCTTCTTCAGTGGCAGCTTTGCGGCTATTTTCTG 2532 Query 47204 CATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263 |||| | || | ||||| || || ||||| |||||||| |||||| | || Sbjct 2531 GCTGAAGAAGCGCGGCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGA 2472 Query 47264 CGAAGGCCTGCACACCAACTTTGCCTGTCT 47293 ||| || |||||| |||||||||| || Sbjct 2471 CGAGGGACTGCACTGTGACTTTGCCTGCCT 2442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475415168249680