Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8407 120 4e-22 >seq8407 Length=16212 Score = 120 bits (132), Expect = 4e-22 Identities = 192/270 (71%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 175901 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 175959 |||||||||||||||| | ||| ||||||||| ||| | | ||||| ||||| || Sbjct 7302 GTGAAGATGTACCTCGGGCTGG-CGCTATCTTTGCCGCCCGTCAACCGCGTACCAAACTG 7360 Query 175960 ACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGAC 176019 ||| | || | || || ||||| ||||| ||| | |||| | ||||| |||| Sbjct 7361 ACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 7420 Query 176020 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCCACATA 176076 ||||| || | || | |||| || |||||||||||||| ||| | |||||||| | Sbjct 7421 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGATGGTAGGCGGACATTTCCGCCACCGA 7477 Query 176077 CGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 176136 |||||||||| |||||||||| ||| |||| ||| | |||||||| | ||| Sbjct 7478 ACCCGCCAACTGGGCCACCTTCACCTCGCGCTTGTCGTTACGCTTGAAGCACGTAAACAG 7537 Query 176137 GACCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166 ||||| | ||| ||||| | ||||| Sbjct 7538 CACCTTCCGCTGGCCCGGCTTCAACCCGTC 7567 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 176818 CTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAAC 176877 ||| ||||| || || ||||||||||| ||| ||||| ||||| || || | || Sbjct 8261 CTTACCGCGCAGCGGAAACACACCGTACGTATCGCGACCGACCACTCCCAGCCCCGACAC 8320 Query 176878 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAG---ATTG 176934 || | || || || || || ||||| |||| ||||||||| || || ||| |||| Sbjct 8321 GGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTGCAGTT--CAGCGAATTG 8378 Query 176935 TGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 176991 | || || || | ||||||||| |||| ||| || || || |||| || ||||| Sbjct 8379 CG-CGAACCGGCATCGTTCGCATCCTCCAGCTTCGGGATGCCCTTAATCTTCGACTT 8434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613396715022120