Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8951 188 1e-42 >seq8951 Length=23152 Score = 188 bits (208), Expect = 1e-42 Identities = 427/636 (67%), Gaps = 7/636 (1%) Strand=Plus/Plus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803 |||||||| || ||||| || || ||||| || | ||||| | || ||||| || || | Sbjct 2270 CAGCAACCGATCCGCCACGAACTCAATGTA-CTGCGACATCAGTTCGCAGTTCATGCCGA 2328 Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863 ||| || || || || | | ||| || |||| || ||| ||||||| ||| | Sbjct 2329 GCATGTCGACTGGCAGTGCCTTGGTCAGGAATTCCTGTTCGATCACGACCGCATCGCGAA 2388 Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 |||| || || || || | | |||||| || | | | | |||| |||| Sbjct 2389 TGATCTCCGTTACGCGCTCCTTCGACGGCTTCTGCACCA---GATACCGGAACATCAGGC 2445 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| ||||||||||||||||| || ||||| | |||||| || | | || | Sbjct 2446 AGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCC 2505 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||| | || ||| || ||||| ||||| |||||||| || || || |||| Sbjct 2506 CTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCACTGAAGAAGA 2565 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 | ||||| || || || ||||| || | | || ||||| ||| || || | Sbjct 2566 TGCCCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGCCTTCTTGCTGGAGA 2625 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTA 160162 |||| | ||||| || |||||||| | |||||||| ||| |||| ||||| Sbjct 2626 TCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCA-GCGTTTCGATCGCGTTG 2684 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 |||| ||| |||||||| || || || | |||||| |||||||||| Sbjct 2685 AACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATT 2744 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || ||||| || || || || |||||||| |||||| | |||||| | Sbjct 2745 TCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACC 2804 Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342 ||||||||||| |||| | | ||||||| | || || | ||||| | ||| || Sbjct 2805 TGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCG 2864 Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCG 160378 ||||| || | ||||| |||||||| || | |||| Sbjct 2865 AAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCG 2900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795012002487920