Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq14285 156 1e-32 seq8295 150 4e-31 seq633 131 4e-25 seq13424 129 1e-24 seq6044 120 7e-22 seq5453 114 3e-20 >seq14285 Length=18903 Score = 156 bits (172), Expect = 1e-32 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||||||| |||||||| |||| |||||||| | || || | |||||| Sbjct 191 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCT 132 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||||||||| ||||||||||| || ||| || ||||| ||| Sbjct 131 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCC 72 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| |||||| | || || || |||| |||||| ||| Sbjct 71 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGATGGTC 12 Query 199598 TTACCCGTGAG 199608 || || || || Sbjct 11 TTTCCGGTCAG 1 >seq8295 Length=14778 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || ||||| || || || ||||| |||| ||||||||| | || ||| Sbjct 4923 CGGAGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTG 4982 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||| || ||||||||||| ||||||||||| |||||| ||||| Sbjct 4983 CGGCCATCTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCC 5042 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| ||||| ||||| | | || || || | Sbjct 5043 TCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGA 5102 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| |||||||| ||||| || Sbjct 5103 GTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTG 5140 >seq633 Length=15238 Score = 131 bits (144), Expect = 4e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||||||||||||||| ||||||||||| || ||| || ||||| Sbjct 1 CCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCC 60 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||||||| |||| |||||| | || || || |||| |||| Sbjct 61 TTATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTG 120 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| || || ||||| || Sbjct 121 ATGGTCTTTCCGGTCAGAGTCTTGACGAAAATCTG 155 >seq13424 Length=49246 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| | ||||||||||| |||| ||||||||| | || ||| Sbjct 209 CGAAGCCGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 150 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || ||||||||||| ||||||||||| ||||||||||| || || ||||| Sbjct 149 CGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCC 90 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| || || | | || || |||| Sbjct 89 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTATCCGACGGCTCGACCTCCAGA 30 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || || ||||| ||||| Sbjct 29 GTGATGGTCTTGCCAGTCAGAGTCTTCAC 1 >seq6044 Length=6192 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || ||||||||||| |||| ||||| || | || || | ||||| Sbjct 4486 AGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGGGTGCGGCCATCC 4427 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||||||||||||||| ||||| || || || ||| Sbjct 4426 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 4367 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| || || | | || || || | || || ||| Sbjct 4366 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 4307 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || || || || Sbjct 4306 TTACCCGTGAGGGTTTTGACGAAGATCTG 4278 >seq5453 Length=57727 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||||||| | || ||| | ||| || ||||||||||| ||||||||| Sbjct 57727 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 57668 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || ||||||||||| || || ||||| || ||||| ||||| ||| ||| Sbjct 57667 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 57608 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 |||| || || | | || || |||| ||||| ||||| || || ||||| ||||| Sbjct 57607 TCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACG 57548 Query 199619 AAAATTTG 199626 || || || Sbjct 57547 AAGATCTG 57540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178703983230269