Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8951 398 8e-106 seq8295 127 2e-24 seq5453 111 2e-19 seq13424 107 2e-18 >seq8951 Length=23152 Score = 398 bits (440), Expect = 8e-106 Identities = 519/710 (73%), Gaps = 6/710 (1%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 |||| || || ||||||||||| ||||| |||||||| |||||| || | || ||| Sbjct 2271 AGCAACCGATCCGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGC 2330 Query 132781 A-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | || || ||||| || | ||| || || || ||||| ||||||| ||| | Sbjct 2331 ATGTCG-ACTGGCAGTGCCTTGGTCAGGAATTCCTGTTCGATCACGACCGCATCGCGAAT 2389 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||| ||| | |||||| || |||| ||||||| || | |||||||| ||| || Sbjct 2390 GATCTCCGTTACGCGCTCCTTCGACGGCTTCTGCACCAGATACCGGAACATCAGGCAGGC 2449 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||| || |||| |||||||| | || || || ||||| ||| |||| || || Sbjct 2450 AAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCCCTGG 2509 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| |||||||| || || ||||| || || || || || ||||| ||||||| ||| Sbjct 2510 CATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCACTGAAGAAGATGCC 2569 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||| || || ||||| || |||| || || || || |||| | ||||||| |||||| Sbjct 2570 CTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGCCTTCTTGCTGGAGATCCA 2629 Query 133080 GCGCAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 | ||||||||| |||||||| |||||| |||||||||| ||||||||| ||||| |||| Sbjct 2630 GTTCAGCGCCCAGTCGGCCTTCTTCTTT-ACGCACGGCAGCGTTTCGATCGCGTTGAACA 2688 Query 133139 AACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198 | ||| | || | || | ||| |||||||| || ||| |||||||| Sbjct 2689 GATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGC 2748 Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258 || ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct 2749 TATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCA 2808 Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318 | || || ||| ||||| |||||||| ||||| ||||| ||||| ||||||||| | Sbjct 2809 CCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCGAAGA 2868 Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGC 133377 |||| || |||||| |||||| || |||||| | || |||| ||||| || | Sbjct 2869 AGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGACTT-GAGCGATTCCCAATCTTTC 2927 Query 133378 GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || ||||||||||| || || ||||| || || || || || Sbjct 2928 ATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTTCCGC 2977 >seq8295 Length=14778 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| | | Sbjct 5143 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCG 5084 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | || |||| ||||| |||||||| || | || || Sbjct 5083 GACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 5024 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| |||||||||||||| || | ||||| || ||||||||| Sbjct 5023 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAGATGGCCGCACTCTGTCGGACTACAAC 4964 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| | || || || ||||||| || Sbjct 4963 ATCCAGAAGGAATCCACCCTTCACCTGGTGCTCCG 4929 >seq5453 Length=57727 Score = 111 bits (122), Expect = 2e-19 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || ||||| |||||||| | || |||||| | | Sbjct 57536 AATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTC 57595 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 || | | | |||| | || | || |||| ||||| |||||||| |||||| || Sbjct 57596 GGATACGATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGAT 57653 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| |||| ||||| || ||||||| Sbjct 57654 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTAC 57713 Query 38421 AACATCCAAAAGGA 38434 |||||||| ||||| Sbjct 57714 AACATCCAGAAGGA 57727 >seq13424 Length=49246 Score = 107 bits (118), Expect = 2e-18 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA- 38314 || || || || || ||||| |||||||| | || |||||| | | || | | | Sbjct 1 GTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGATACGATCGAG 60 Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCA 38373 |||| | || | || |||| ||||| |||||||| |||||| || || ||||| || | Sbjct 61 AACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATCAGCAGCGTCTGA 118 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| ||||| |||||||| |||| ||||| || ||||||||||||||| |||| Sbjct 119 TCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAACATCCAGAAGG 178 Query 38434 AAGCGACGCTGCATTTGGTGCTGCG 38458 | |||| |||| ||||| || || Sbjct 179 AGTCGACCTTGCACTTGGTCCTCCG 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500082725130880