Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8951 102 1e-16 seq8407 100 4e-16 >seq8951 Length=23152 Score = 102 bits (112), Expect = 1e-16 Identities = 102/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 102261 ||||||||| ||||||||| ||| ||| |||| |||||| ||||| |||||||| | Sbjct 2576 TGTTGAGGGCATCTTCTTCAGTGGCAGCTT-TGCGGCTATTTTCTGGCTGAAGAAGCGCG 2518 Query 102262 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321 | || |||||||| || ||||| |||||||| ||||| || ||||||||||| ||| Sbjct 2517 GCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAGGGACTGCACT 2458 Query 102322 AAGAGTTTGC 102331 || ||||| Sbjct 2457 GTGACTTTGC 2448 >seq8407 Length=16212 Score = 100 bits (110), Expect = 4e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 ||| || || || || || |||||||| ||||||||| ||||| || |||| || Sbjct 8261 CTTACCGCGCAGCGGAAACACACCGTACGTATCGCGACCGACCACTCCCAGCCCCGACAC 8320 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTT--GCCAGATTGT 177028 || | |||||| || || || ||||| |||| |||||| || || || || | |||| Sbjct 8321 GGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTGCAGTTCAGCGA-ATTGC 8379 Query 177029 GCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTTTCGC 177088 || | ||| || | ||||||||| |||| || || || || |||| || ||||| | Sbjct 8380 GC-GAACCGGCATCGTTCGCATCCTCCAGCTTCGGGATGCCCTTAATCTTCGACTTCTTC 8438 Query 177089 GTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTTTG 177131 | |||| || ||| | || || || | |||||||||||| Sbjct 8439 GAACCGGAAGTTTTGGCCAGATCTGTCTGCGCCTTAAACTTTG 8481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620630612053040