Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq14285 149 1e-30 seq633 127 5e-24 seq6044 125 2e-23 seq5453 111 3e-19 seq13424 104 5e-17 >seq14285 Length=18903 Score = 149 bits (164), Expect = 1e-30 Identities = 145/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || |||||||| || | || || | |||||||| Sbjct 188 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTCC 129 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || |||||||| |||||||| || || ||| Sbjct 128 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGA 69 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| ||||||||||| ||||| || || || | |||||| Sbjct 68 ATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGATGGTCTTT 9 Query 195112 CCTGTCA 195118 || |||| Sbjct 8 CCGGTCA 2 >seq633 Length=15238 Score = 127 bits (140), Expect = 5e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || |||||||| || || || || |||||||| |||||||| Sbjct 1 CCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCC 60 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || ||||| || ||| |||||||| ||||||||||| ||||| || || || Sbjct 61 TTATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTG 120 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||| ||| || ||||| | ||||| Sbjct 121 ATGGTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT 158 >seq6044 Length=6192 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || ||||||||||||| || || | ||||| || Sbjct 4483 ACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGGGTGCGGCCATCCTCC 4424 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || || || || || || ||||| || Sbjct 4423 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGG 4364 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || ||||| || || ||||| || || |||||||||| ||||| Sbjct 4363 ATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 4304 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 4303 CCCGTGAGGGTTTTGACGAAGATCTGCAT 4275 >seq5453 Length=57727 Score = 111 bits (122), Expect = 3e-19 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009 || || || || ||||| |||| ||||| | || || || |||||||| || |||||| Sbjct 57727 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 57668 Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || || || || || ||||| || || || || ||||| || || || |||||||||| Sbjct 57667 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 57608 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 || || || ||||| || || || || || | ||||| || |||| ||| || ||| Sbjct 57607 TCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACG 57548 Query 195130 AACACTTGCATT-TATGG 195146 || | |||||| ||||| Sbjct 57547 AAGATCTGCATTCTATGG 57530 >seq13424 Length=49246 Score = 104 bits (114), Expect = 5e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || || || |||||||| || Sbjct 185 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCG 126 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| || || || || ||||| || || || |||| Sbjct 125 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 66 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 |||||||| || || ||||| || || || || || | ||||| || |||| ||| Sbjct 65 ACGTTCTCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTC 6 Query 195124 TTTAC 195128 || || Sbjct 5 TTCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109276801138169