Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq8951 113 5e-20 >seq8951 Length=23152 Score = 113 bits (124), Expect = 5e-20 Identities = 350/542 (65%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 ||||||| || ||||| ||||| || ||||||||||| | |||| || || || Sbjct 2436 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 2495 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | || ||||| || || | || || | |||||| |||| ||||| ||| Sbjct 2496 AACGTCAGCCCTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCA 2555 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 ||||| || || || || || || || ||||| | | ||| ||| | | || | Sbjct 2556 CTGAAGAAGATGCCCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAAGTTGGCCTTC 2615 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 || | ||||| ||||| ||||| || |||||||| ||||| || |||| || || Sbjct 2616 TTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCG 2675 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 || | || || |||||| ||||| | | || | || | || |||| | Sbjct 2676 ATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGC 2735 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 ||||||||| ||| | || || || || |||||||| ||||| || || | || Sbjct 2736 GAGTACATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCC 2795 Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || || | ||| || || | || | || |||| ||| || || || || || || Sbjct 2796 TCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCC 2855 Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA 19431 || || || || || | ||| || || || || || || | | | Sbjct 2856 GAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGACTTGAGCGAT 2915 Query 19432 TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCT 19491 | |||||| || || || || |||| || || ||||| |||||||| || ||||| || Sbjct 2916 TCCCAATCTTTCATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTTCC 2975 Query 19492 GC 19493 || Sbjct 2976 GC 2977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562007571231480