Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8295 116 3e-21 seq14080 107 2e-18 seq6044 93.3 3e-14 >seq8295 Length=14778 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| ||||| || || || ||||| || | | ||| | | |||| |||| || Sbjct 4941 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCTTCCAGCTGT 5000 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| |||||| ||||| || || || || || || || || || || Sbjct 5001 TTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTG 5060 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | ||||| || | || || |||||||||| || |||||||| Sbjct 5061 GCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTG 5120 Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473 | ||||| || || |||||||||||| Sbjct 5121 AGTGTTTTCACGAAAATCTGCATGGTT 5147 >seq14080 Length=20585 Score = 107 bits (118), Expect = 2e-18 Identities = 195/282 (69%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 13655 AATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGCTCC 13714 || ||||| || || || || | ||||||| || ||||| ||| | ||| |||||| Sbjct 7881 AACTTTCGCTTGCAGCCGTCGTAGTTCATGTACCGAATTTTGCCAAAAATTTCCCGCTCC 7822 Query 13715 ATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTGGGA 13774 |||| | |||| || | ||| || ||||||||||| ||| | || || || ||| Sbjct 7821 TTCCATCCCTGATCATGGATGCCGGCAATGGACCACATGCACCCGACGTACCCATTCGGA 7762 Query 13775 TCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGG-CGTTGATTAA-AGCCACTG 13832 ||||| ||||||| |||||| ||||| | ||| |||| |||| | || || | Sbjct 7761 TCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATGGCCGTT--TCAAGCGCTTCCT 7704 Query 13833 TAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCGTGCA 13892 |||| | | ||| |||| |||||| || |||||||| || | || | ||||||| Sbjct 7703 CGGGCGTTTTCGTCCACTCTAGTATTTTCTTCGCCCAATACATGCGCAGGAACCCGTGCA 7644 Query 13893 TTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACA 13934 | ||| | | | | ||||| ||| || |||||||||| Sbjct 7643 TCTTGGCCTCCTTCACTAGCTGCAGCTGGGCTGCGTTCCACA 7602 >seq6044 Length=6192 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| || || || || ||||||||||||| | || | | |||| |||| || Sbjct 4478 ATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGGGTGCGGCCATCCTCCAGCTG 4419 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | |||||| ||||| ||||| || || || || || || || || Sbjct 4418 CTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCTT 4359 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | || || || | || || ||||| || | || || || || Sbjct 4358 CGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGT 4299 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 4298 GAGGGTTTTGACGAAGATCTGCAT 4275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396208819333299