Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq3783 105 9e-18 >seq3783 Length=10208 Score = 105 bits (116), Expect = 9e-18 Identities = 182/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 || |||||| || || || ||||||||||| ||||| | | ||| || || || Sbjct 4529 CAAATCCTCATCCGAGAACCCGGTACCGATCTTGCAAATCGTCTGATACTCCTCATTTTC 4588 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141 | | ||| |||||||| | |||| | ||||| ||||| || | || ||| || Sbjct 4589 GTCGTCGTAGCAGGCGAGCAGGAAACCACCGTACGTTCCGGTACGTTTGCCCCTTCCTCG 4648 Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201 | |||| |||||||| |||||||| || | |||| ||| || | ||| |||||||| Sbjct 4649 GTAGCCACCGATAACGACCAGATCGAGCGAATCGCCCACTCCGGATAGGTAGTCTTTCTT 4708 Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTAC-GTCCAGGG 197260 ||| || | |||| | | || | || ||||| ||||| ||||| || || | | || | Sbjct 4709 CAGCTTCAACCAGTTGCGCGACCGTTTCGCAATTTCGTACGTTGC-TTCACGGACGAGCG 4767 Query 197261 TCTTGATCATCAATCCCTCGCA 197282 | || | ||| | |||||||| Sbjct 4768 TTTTTACCATGAGGCCCTCGCA 4789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676607729458160