Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq4824 156 6e-33 >seq4824 Length=29019 Score = 156 bits (172), Expect = 6e-33 Identities = 352/522 (67%), Gaps = 8/522 (2%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTT-CTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 || || ||||| || ||||| || || | ||||| | || | ||| |||||||| || || Sbjct 22960 CCCGTCGCAATGACGAAATCTTCCGGCTGCTTCT-GCTGCATCATCAACCACATTGCTTC 22902 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 ||| || ||| | || || |||||||| || | ||| ||||| || || | | || Sbjct 22901 GACGTAGTCTTTCGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACCGAGCTCGACGCA 22842 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || |||| || || || ||| | | | || || || || || ||||| Sbjct 22841 CTCCTGCTGGCCGAGCGAAAT--CTTCGCCACCGAGCGAGTGATTTTGCGTGTCACAAAG 22784 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 | ||||| | | || ||||| || || ||||||||||| |||||||| |||| | Sbjct 22783 TTCTCACCCCTGCGGGGTGATTCGTGGTTGAAAAGAATACCGTTACAGGCAAACATGTTG 22724 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATAAGG 48083 || | || ||||| || | ||||||||||| || || | ||| || |||| | || || Sbjct 22723 TACGCCTCGCGATAATTGATCACTATCCAGTAGCCGTACATTTTCGC-ACACGCGTACGG 22665 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 || || |||||||| || || | || |||| || || || |||||| ||||| || Sbjct 22664 CGAGCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCAACCACCTTGCCATAGAG 22605 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203 ||| |||||||| || |||| || ||| | | |||| | | ||||| || Sbjct 22604 TTCGGACGTGGATGCCTGGTAGAAGCGGACCGTCTTTTCCTGTCCGACGGTACGGATGGC 22545 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 ||||||| | ||| || |||| ||||| | | ||||| ||| || || || Sbjct 22544 ATCAAGCAGCCGCAGCGTACCTACCGCATCCACTTCCGCCGTATATTCGCTCAGGTCGAA 22485 Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||||| ||| ||||| || || || |||| || || || || Sbjct 22484 CGAAATCTTGACATGGCTTTGCGCAGCAAGGTTGTAGATTTC 22443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665374552777240