Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4155 145 6e-30 seq673 100 2e-16 >seq4155 Length=6305 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| || | |||||||||||| || || ||||| ||||||||||| |||||||| | Sbjct 355 TTGTGGTCAAACTGCGTTTGCGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGGTAGGTA 414 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| |||| ||| || | ||| | |||||| ||||| || |||||||| ||| Sbjct 415 GCGGGACGACCAATCGCTCGAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATACCG 474 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || || || || || |||||||| |||||| ||||| ||||| | |||||| || Sbjct 475 TTTCCTTTACCCTCTACCTTGGCATTGATGCGAGGCATCTTGTACCTGTAGAAGATATCG 534 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 | ||| || || || ||||| || || |||| || || Sbjct 535 GTCACGTTACGATTCACGTTTACGGTTGCCATGGTTGC 572 >seq673 Length=10092 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 9575 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGACCGTGGAA 9634 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || || ||||| ||||| |||| | ||| || | ||||| | || || || Sbjct 9635 GCCACAGGCCTTGCATCCCTGCGAGATTGTACCCTTCTTTGACGACACCAGCAGATCCGT 9694 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| || ||| || ||||| ||||| | ||| || Sbjct 9695 CTCCGGGTTGTCGCACTCCGGGCACAGGACGAACCGACGAATGAATCCATCCAACAGATC 9754 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| ||| ||||| | || || || ||||| |||||||| Sbjct 9755 CTGCAGCTTGGCGGCATCGTGCGCACCATTCACAATGAAGCGTTCGTT 9802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412769111078651