Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015-
03-19] 14,407 sequences; 146,379,160 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq4722 111 1e-18
seq4721 111 1e-18
>seq4722
Length=14951
Score = 111 bits (122), Expect = 1e-18
Identities = 923/1479 (62%), Gaps = 20/1479 (1%)
Strand=Plus/Plus
Query 281405 TTGTTTGTTGATTTATC-AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAA 281463
||||| || || || || |||| | ||||| || |||||||| |||||||| | ||| ||
Sbjct 655 TTGTTGGTCGACTTCTCGAGCGCC-GTCACGTTCAGAATACCGTTGGCATCAATATCGAA 713
Query 281464 TGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGT 281523
|| |||||||| || ||||| || | | || || ||||| || ||| | || |
Sbjct 714 CGTCACTTCAATCTGCGGGACACCGCGAGGTGCTGGCGGGATTCCGCTCAACTCGAACTT 773
Query 281524 TCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAA 281582
||||| ||| || || || || | || ||||||||||| | ||||| ||||
Sbjct 774 GCCCAGCAGATTGTTGTCCTTCGTCATGGCACGCTCACCCTCGAACACCTGGATCAGTA- 832
Query 281583 CTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAA-GGAATTGTT 281641
| | | ||| ||||| || ||||| || || | |||| | | | | || || ||
Sbjct 833 CACCGGGTTGGTTATCCGAGTAAGTGGTGAA-AGTCTGCGTCTGCTTCGTCGGGATGGTG 891
Query 281642 GTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGA 281701
||||| | | || | | ||| | ||| || || || || | |||||| || ||
Sbjct 892 GTGTTGCGCTTGATCAGCACCGACATCACACCGCCGGCGGTCTCGATACCAAGCGACAGC 951
Query 281702 GGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATA 281761
|| || ||||| | || | | || || | | || | | ||| |||||
Sbjct 952 GGGGTCACATCGAGCAGCAACAGATCCTGCACCTCCTCCGACTTGTCACCGTGCAGAATG 1011
Query 281762 GCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGT 281821
|| || || | |||||||| || ||||| || ||||| || || | | | || |
Sbjct 1012 GCGGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCCGGGTTGATCGACTTGTTCAAC 1071
Query 281822 TTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCC 281880
| || || ||||| || | || || | ||| ||||| || ||||||| |||||
Sbjct 1072 TCCTTGCCGTTGAAGAAGTCCTGCAGCAGCT-TCTGCACCTTGGGGATACGAGTCGATCC 1130
Query 281881 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 281940
|| || | || || || || | | || |||| || | || | | ||
Sbjct 1131 ACCGACCAGCACGATGTCGTGGATGCTAGCCTTGTCCATCTTGGCGTCACGCAGCGCCTT 1190
Query 281941 TTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 282000
|| || || || | | | |||| || | || || ||||| || |
Sbjct 1191 CTCCACTGGCTCCATCGTGGAGCGGAACAGATCGGCGTTCAGCTCCTCGAAACGGGCACG 1250
Query 282001 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060
|| | | | | |||| |||| ||||||| ||||| | ||||| | | |||
Sbjct 1251 CGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAGCGAATCGATCTCAATGCTGGCTTG 1310
Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120
||||| ||||| || | || || || |||||||| || || | || | || || ||
Sbjct 1311 CGTCGACGAAGACAGCGTGCGCTTCGCGCGTTCACAAGCCGTGCGCAGACGACGCAACGC 1370
Query 282121 TT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 282178
||| | | || |||||| | || | ||| | |||||| || | | | |
Sbjct 1371 ACGCTTGTTCGTGGA--CAAATCCTTCTTGTGTTTGCGCTTGAATTCCTGAGCGAAGTGG 1428
Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238
| || ||||| || || || || ||||| |||| | || | ||| | || | |
Sbjct 1429 TTCACCAGACGGTTGTCGAAGTCCTCACCGCCCAGATGGGTGTCTCCGGCGGTCGACTTC 1488
Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298
|| | ||| | || || || | |||| | | ||||| ||| || || |||| |
Sbjct 1489 ACCTCGAAGATGCCGTCATCGATGGACAGGATCGACACATCGAAGGTACCGCCGCCCAGA 1548
Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358
|| || || || ||||| ||| || || || || ||||| ||||| | ||
Sbjct 1549 TCGAAGATCAGCACATTGCGTTCGCCAGCTGTCTTCTTGTCCAGACCGTACGCGATGGCG 1608
Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418
|| || || ||||| || || || | || || || | || | || |||| |||||
Sbjct 1609 GCCGCTGTCGGTTCGTTGATGATACGCAGCACGTTCAATCCGGAGATGGTTCCGGCATCC 1668
Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478
|| || || || | ||| || ||||| || |||||||| ||||| || ||||| | ||
Sbjct 1669 TTCGTCGCCTGACGTTGCGAGTCGTTGAAGTATGCAGGCACAGTGATGACGGCGTTGGTC 1728
Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538
|| || || | ||| || || |||| ||||| || | || | ||| ||
Sbjct 1729 ACGGTCTTGCCCAGATAGGCTTCGGCCGTTTCCTTCATCTTTGTCAACACCATCGAGCTG 1788
Query 282539 ATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597
| | || || ||| | | ||| ||| | || || | | | ||||||
Sbjct 1789 ACCTCCTCCGG-GAAGAACGACTTCTTCTCACCCTTGTACTCGACCTGGATCTTTGGTTT 1847
Query 282598 ATTACCAACATT--AATA-ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG 282654
|| || | | | || | ||| ||||| | ||||| || | || | |
Sbjct 1848 G---CCCTCAATCGACTCCACCTCAAACGGCCAGTGCTTCATGTCAGCCTGGATGGCGGG 1904
Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714
|| | || | | ||||| | || ||||| || || || || ||||| || || |
Sbjct 1905 ATCGTCGAACTTACGGCCAATCAGACGCTTTGCGTCGAAGATGGTGTTGGTCGGGTTCAT 1964
Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774
|| | || | ||||| ||||| |||||||| | || || || || || | |||||
Sbjct 1965 GGCTACCTGGTTCTTGGCGGCATCGCCAATCAGGCGCTCGGTGTCAGTGAAGGCCACATA 2024
Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834
||||| || || || ||||| || || || |||||||||||||| || || | || |
Sbjct 2025 CGATGGTGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACCTTGCCGTGCTGGAA 2084
Query 282835 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 282873
|| || ||||| || | || || || | |||||||||
Sbjct 2085 CACTCCGACACAGCTGTAGGTCGTGCCCAGATCAATACC 2123
>seq4721
Length=21953
Score = 111 bits (122), Expect = 1e-18
Identities = 923/1479 (62%), Gaps = 20/1479 (1%)
Strand=Plus/Minus
Query 281405 TTGTTTGTTGATTTATC-AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAA 281463
||||| || || || || |||| | ||||| || |||||||| |||||||| | ||| ||
Sbjct 3286 TTGTTGGTCGACTTCTCGAGCGCC-GTCACGTTCAGAATACCGTTGGCATCAATATCGAA 3228
Query 281464 TGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGT 281523
|| |||||||| || ||||| || | | || || ||||| || ||| | || |
Sbjct 3227 CGTCACTTCAATCTGCGGGACACCGCGAGGTGCTGGCGGGATTCCGCTCAACTCGAACTT 3168
Query 281524 TCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAA 281582
||||| ||| || || || || | || ||||||||||| | ||||| ||||
Sbjct 3167 GCCCAGCAGATTGTTGTCCTTCGTCATGGCACGCTCACCCTCGAACACCTGGATCAGTA- 3109
Query 281583 CTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAA-GGAATTGTT 281641
| | | ||| ||||| || ||||| || || | |||| | | | | || || ||
Sbjct 3108 CACCGGGTTGGTTATCCGAGTAAGTGGTGAA-AGTCTGCGTCTGCTTCGTCGGGATGGTG 3050
Query 281642 GTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGA 281701
||||| | | || | | ||| | ||| || || || || | |||||| || ||
Sbjct 3049 GTGTTGCGCTTGATCAGCACCGACATCACACCGCCGGCGGTCTCGATACCAAGCGACAGC 2990
Query 281702 GGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATA 281761
|| || ||||| | || | | || || | | || | | ||| |||||
Sbjct 2989 GGGGTCACATCGAGCAGCAACAGATCCTGCACCTCCTCCGACTTGTCACCGTGCAGAATG 2930
Query 281762 GCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGT 281821
|| || || | |||||||| || ||||| || ||||| || || | | | || |
Sbjct 2929 GCGGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCCGGGTTGATCGACTTGTTCAAC 2870
Query 281822 TTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCC 281880
| || || ||||| || | || || | ||| ||||| || ||||||| |||||
Sbjct 2869 TCCTTGCCGTTGAAGAAGTCCTGCAGCAGCT-TCTGCACCTTGGGGATACGAGTCGATCC 2811
Query 281881 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 281940
|| || | || || || || | | || |||| || | || | | ||
Sbjct 2810 ACCGACCAGCACGATGTCGTGGATGCTAGCCTTGTCCATCTTGGCGTCACGCAGCGCCTT 2751
Query 281941 TTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 282000
|| || || || | | | |||| || | || || ||||| || |
Sbjct 2750 CTCCACTGGCTCCATCGTGGAGCGGAACAGATCGGCGTTCAGCTCCTCGAAACGGGCACG 2691
Query 282001 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060
|| | | | | |||| |||| ||||||| ||||| | ||||| | | |||
Sbjct 2690 CGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAGCGAATCGATCTCAATGCTGGCTTG 2631
Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120
||||| ||||| || | || || || |||||||| || || | || | || || ||
Sbjct 2630 CGTCGACGAAGACAGCGTGCGCTTCGCGCGTTCACAAGCCGTGCGCAGACGACGCAACGC 2571
Query 282121 TT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 282178
||| | | || |||||| | || | ||| | |||||| || | | | |
Sbjct 2570 ACGCTTGTTCGTGGA--CAAATCCTTCTTGTGTTTGCGCTTGAATTCCTGAGCGAAGTGG 2513
Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238
| || ||||| || || || || ||||| |||| | || | ||| | || | |
Sbjct 2512 TTCACCAGACGGTTGTCGAAGTCCTCACCGCCCAGATGGGTGTCTCCGGCGGTCGACTTC 2453
Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298
|| | ||| | || || || | |||| | | ||||| ||| || || |||| |
Sbjct 2452 ACCTCGAAGATGCCGTCATCGATGGACAGGATCGACACATCGAAGGTACCGCCGCCCAGA 2393
Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358
|| || || || ||||| ||| || || || || ||||| ||||| | ||
Sbjct 2392 TCGAAGATCAGCACATTGCGTTCGCCAGCTGTCTTCTTGTCCAGACCGTACGCGATGGCG 2333
Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418
|| || || ||||| || || || | || || || | || | || |||| |||||
Sbjct 2332 GCCGCTGTCGGTTCGTTGATGATACGCAGCACGTTCAATCCGGAGATGGTTCCGGCATCC 2273
Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478
|| || || || | ||| || ||||| || |||||||| ||||| || ||||| | ||
Sbjct 2272 TTCGTCGCCTGACGTTGCGAGTCGTTGAAGTATGCAGGCACAGTGATGACGGCGTTGGTC 2213
Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538
|| || || | ||| || || |||| ||||| || | || | ||| ||
Sbjct 2212 ACGGTCTTGCCCAGATAGGCTTCGGCCGTTTCCTTCATCTTTGTCAACACCATCGAGCTG 2153
Query 282539 ATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597
| | || || ||| | | ||| ||| | || || | | | ||||||
Sbjct 2152 ACCTCCTCCGG-GAAGAACGACTTCTTCTCACCCTTGTACTCGACCTGGATCTTTGGTTT 2094
Query 282598 ATTACCAACATT--AATA-ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG 282654
|| || | | | || | ||| ||||| | ||||| || | || | |
Sbjct 2093 G---CCCTCAATCGACTCCACCTCAAACGGCCAGTGCTTCATGTCAGCCTGGATGGCGGG 2037
Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714
|| | || | | ||||| | || ||||| || || || || ||||| || || |
Sbjct 2036 ATCGTCGAACTTACGGCCAATCAGACGCTTTGCGTCGAAGATGGTGTTGGTCGGGTTCAT 1977
Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774
|| | || | ||||| ||||| |||||||| | || || || || || | |||||
Sbjct 1976 GGCTACCTGGTTCTTGGCGGCATCGCCAATCAGGCGCTCGGTGTCAGTGAAGGCCACATA 1917
Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834
||||| || || || ||||| || || || |||||||||||||| || || | || |
Sbjct 1916 CGATGGTGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACCTTGCCGTGCTGGAA 1857
Query 282835 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 282873
|| || ||||| || | || || || | |||||||||
Sbjct 1856 CACTCCGACACAGCTGTAGGTCGTGCCCAGATCAATACC 1818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3739923077183982
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