Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq8295 102 2e-16 seq14285 96.9 8e-15 seq6044 84.2 5e-11 >seq8295 Length=14778 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || |||||| | || || || ||| ||||| ||||| Sbjct 5128 AAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCGGACACGATCGAAAAT 5069 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| ||||| || | || |||||| Sbjct 5068 GTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAGCAGCGTCTGATCTTC 5009 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||| |||||||||| | ||| || | || |||||| ||||||| || || Sbjct 5008 GCCGGCAAACAGCTGGAAGATGGCCGCACTCTGTCGGACTACAACATCCAGAAGGAATCC 4949 Query 206365 ACTCTTCACCTTGT 206378 || |||||||| || Sbjct 4948 ACCCTTCACCTGGT 4935 >seq14285 Length=18903 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || || ||||| || ||||| |||| ||||| || ||||| |||| || ||| Sbjct 1 CTGACCGGAAAGACCATCACGCTGGAGGTGGAGCCATCGGACACCATCGAGAACGTGAAG 60 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 |||||||| || || ||||| || || || || | || |||||||||||| Sbjct 61 GCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGA 120 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||| |||||||||| | || || | || ||||| ||||||| ||||| ||||| Sbjct 121 AAGCAGCTGGAAGATGGCCGTACCCTGTCAGACTACAATATCCAGAAGGAGTCCACTCTC 180 Query 206371 CACCTTGT 206378 ||||| || Sbjct 181 CACCTGGT 188 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||| ||||| ||||| ||||||| ||| ||||| | || || | ||||||||| Sbjct 188 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTCC 129 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||||||||||| || || || ||| Sbjct 128 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGA 96 >seq6044 Length=6192 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || || || | || || || || || Sbjct 4278 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCGGAT 4337 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 4338 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCAGCAG 4397 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| |||| ||||| | || || |||||||||| || Sbjct 4398 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGATTACAATATC 4457 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || ||||| || || Sbjct 4458 CAGAAGGAGTCGACCCTTCATCTGGT 4483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181602648067847