Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq3338 100 3e-16 >seq3338 Length=23718 Score = 100 bits (110), Expect = 3e-16 Identities = 179/256 (70%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 5341 TCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAA- 5399 |||||||||| ||||| | || || || | |||| |||| | ||| | ||| Sbjct 20621 TCGCAGATGAATTGCGCAATACGATCACCCTTCTTCACCTCGAAATCCACTTCG--GAAT 20678 Query 5400 -GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCA 5458 |||||| ||||| || || | ||| || ||| ||||| ||| |||||||| || |||| Sbjct 20679 GGTTGAACAGCACAACACCAACGTTTCCCCGGTAGTCCTCGTCAACGACGCCTGCCCCCA 20738 Query 5459 CATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCGT 5518 |||| | |||||| || ||||| || ||||| | || || || || ||||| ||||| | Sbjct 20739 CATCGATGAAGTTTTTCACCGCCAGCCCGGAGCGTGGTGCTACACGTCCGTAACAGCCTT 20798 Query 5519 ATGGCGGGTGGATCTGCAGATCGGTCAGCACTACCGCGCGCCCCATCGG--CGGCAAGGT 5576 || || | ||| | || |||| || | | || || |||| ||||| || Sbjct 20799 CCGGTACCTGCACCTGGATGTCAGTCATTACGAGCT-GCTTACC-TCGGGCCGGCACCGT 20856 Query 5577 GTAGTCGTAAGCGCTG 5592 ||||||||| |||||| Sbjct 20857 GTAGTCGTAGGCGCTG 20872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447730554800520