Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq4824 105 1e-17 >seq4824 Length=29019 Score = 105 bits (116), Expect = 1e-17 Identities = 325/492 (66%), Gaps = 12/492 (2%) Strand=Plus/Plus Query 161305 GGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACA 161364 |||||| |||||||||||||||| || | ||||| ||| || || || || Sbjct 22574 GGTCCGCTTCTACCAGGCATCCACGTCCGAACTCTATGGCAAGGTGGTTGAAACGCCGCA 22633 Query 161365 GAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGT-AGCTAAACTCTATGGAT 161423 ||| |||| ||| || ||||| || || || || || |||| || ||| | || || | Sbjct 22634 GAACGAAAAAACTCCATTCTATCCGCGCTCGCCGTA-CGCGTGTGCGAAAATGTACGGCT 22692 Query 161424 ATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTAT 161483 | ||||| || | || || | ||| || ||| ||| ||| |||||||| | Sbjct 22693 ACTGGATAGTGATCAATTATCGCGAGGCGTACAACATGTTTGCCTGTAACGGTATTCTTT 22752 Query 161484 TCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGAC 161543 ||||||| || ||||| || ||||||||| || || || || || || ||| | | Sbjct 22753 TCAACCACGAATCACCCCGCAGGGGTGAGAACTTTGTGACACGCAAAATCACT--CGCTC 22810 Query 161544 TATCCCGTA---TTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAA 161600 | || | || | | || | ||||| || | | || |||||||| | || | Sbjct 22811 GGTGGCGAAGATTTCGCTC-GGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGA 22869 Query 161601 GACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGG 161660 || || ||||| || || ||||||| || || || |||||||||||| | || ||| Sbjct 22870 AGCGCGACTGGGGCCACGCGAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGA 22929 Query 161661 AAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGACTTTGTAG 161720 | || || || | || ||||| || || || | |||| ||| || ||||| | Sbjct 22930 AGCAGCCGGAAGATTTCGTCATTGCGACGGGCGAAACGCATTCGGTGCGAGAATTTGTCG 22989 Query 161721 AGGCATC-TGCTGAATACTTTGGTATGA-AGATTGAGTGGCAGGGTGAAGGATTGGATGA 161778 || | | | | | ||| |||| | || |||| ||||||| || || | ||||| Sbjct 22990 AGCAAGCGTTCCG-GTACATTGG-ACGAGAGATCGAGTGGCGAGGGACGGGCGTCGATGA 23047 Query 161779 AGTGGGTATAGA 161790 ||||| ||||| Sbjct 23048 GGTGGGAATAGA 23059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729798148803160