Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8951 116 5e-21 >seq8951 Length=23152 Score = 116 bits (128), Expect = 5e-21 Identities = 296/447 (66%), Gaps = 5/447 (1%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 ||||| | |||||| |||||||| || || ||||| || | || | ||||| || Sbjct 2436 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAG 2495 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || |||||||| || ||||| || ||||| || || || ||||| ||| Sbjct 2496 AACGTCAGCCCTGGCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCA 2555 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG--TAT 39785 ||||||||||| || || || || || ||||| | | || || || ||| | Sbjct 2556 CTGAAGAAGATGCCCTCAACAGCAGCGAACGCAACCACACGTTC-CCCAAAGTTGGCCTT 2614 Query 39786 CATTATG--TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843 | | || ||||| ||| | ||||| || || ||||||||||| || |||| ||||| Sbjct 2615 CTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTC 2674 Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || || || || ||||| | || | || | || || || || | ||| Sbjct 2675 GATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAG 2734 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 |||||||| ||| | ||| || ||||| |||||||| ||||| || || | || Sbjct 2735 CGAGTACATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGC 2794 Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 || || | || ||||| | || | ||| ||| ||| || || || || || || Sbjct 2795 CTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTC 2854 Query 40024 ACTAGCGGCAAAAAATGCCAATACATG 40050 ||||| || || || | ||| || Sbjct 2855 CGAGGCGGCGAAGAAGGCAAGTACGTG 2881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686785096311480