Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq10804 91.5 1e-13 >seq10804 Length=10989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 231/346 (67%), Gaps = 14/346 (4%) Strand=Plus/Plus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 ||||||| | || ||||| || || ||||| | ||| || ||||| |||||||| | || Sbjct 304 AGGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGGCACTTTGGTGCAAAATACAAAAC 363 Query 40925 TATGTACTCTGA---TTATACCAATAAAGGAATGGATCAA-TTACAGTGCGTTATAGATA 40980 || | ||| |||| | |||| || || || || ||| | || || || | Sbjct 364 ---GTGCCATGACGATTATTCTGGGCAAGGCATAGACCAGCTTGCAGAG-GTAATCGACA 419 Query 40981 CGATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 ||||||| | | || |||| | ||| || || || |||| ||||| || | | Sbjct 420 AGATTAAAAACAACCCGTACGATCGTCGA---ATCATCATGAGCGCCTGGAATCCTTCCG 476 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATG 41097 | | | | ||||| | ||||||||||||| || ||| |||| ||| || | Sbjct 477 ATATCCCTAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACG 536 Query 41098 GTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTA 41157 | ||| | ||||| ||| |||| ||| |||| | || |||| | || || || || | Sbjct 537 GAGAATTATCATGCCAAATGTACCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCA 596 Query 41158 ACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 |||| || || || || ||||||| ||||||| || || || || Sbjct 597 ACATCGCAAGCTACTCTTTGCTCACCCATATGATCGCGCATGTCAC 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397386212564035