Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8951 102 1e-16 seq8407 95.1 1e-14 >seq8951 Length=23152 Score = 102 bits (112), Expect = 1e-16 Identities = 102/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 94885 ||||||||| ||||||||| ||| ||| |||| |||||| ||||| |||||||| | Sbjct 2576 TGTTGAGGGCATCTTCTTCAGTGGCAGCTT-TGCGGCTATTTTCTGGCTGAAGAAGCGCG 2518 Query 94886 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 94945 | || |||||||| || ||||| |||||||| ||||| || ||||||||||| ||| Sbjct 2517 GCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAGGGACTGCACT 2458 Query 94946 AAGAGTTTGC 94955 || ||||| Sbjct 2457 GTGACTTTGC 2448 >seq8407 Length=16212 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407 ||| || || || || || |||||||| ||| ||||| || || || |||| || Sbjct 8261 CTTACCGCGCAGCGGAAACACACCGTACGTATCGCGACCGACCACTCCCAGCCCCGACAC 8320 Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTTTCCAG---ATTG 169464 || | || || |||||||| |||||||| | ||||||||| || || ||| |||| Sbjct 8321 GGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTGCAGTT--CAGCGAATTG 8378 Query 169465 TGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTTTCG 169524 || | ||| || | ||||||||| |||| || || || || |||| || ||||| Sbjct 8379 CGC-GAACCGGCATCGTTCGCATCCTCCAGCTTCGGGATGCCCTTAATCTTCGACTTCTT 8437 Query 169525 CGTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTTTG 169568 || |||| || ||| | || || || | |||||||||||| Sbjct 8438 CGAACCGGAAGTTTTGGCCAGATCTGTCTGCGCCTTAAACTTTG 8481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583155762020680